Gene Franean1_5361 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5361 
Symbol 
ID5673695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp6465464 
End bp6466015 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content68% 
IMG OID641244219 
ProductMarR family transcriptional regulator 
Protein accessionYP_001509625 
Protein GI158317117 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACGGG AATCTGTTTC GGTGGAGGGG AGAGCGGAGG GGAGAGATGA AGCGGTACCG 
ACCGTCGCCG ACGCTCCGAT GAGCGAGGCT CTCTTCCGTG CTGCCCGTGT GCACCGGATC
ATGGCCGGCA CTCTGCTGCG CGACACCGGC CTGTATCCGG GCCAGGAACT GCTGATGATG
CAGCTGTGGG AACGCGGCGA GCAGCGCCAA GCGGATCTGA TCAAAACGCT CGGCCTGGAT
CCGTCGACCG TCACCAAGAT GCTGCAGCGC CTGGAGCAGT CCGGCTTCGT CACCCGCAAA
CCGTCCCCCC ATGACCGCCG GGCCGTCGTG GTGAGCGCCA CCCGCGCGGG CCAGGCCCTG
CGTGGCCAGG TCAGGCAGGC ATGGAGCGAG CTGGAACAGG TCACCGCAGC CGGCTTCACC
GAAGCGGAGT ACCGCCAGGC CATGCGCGTA CTGACCCGGA TCGAAACAAA CCTCACGACC
CCACCGCCCG CCAACGACCC GCCGACACCG CCAACCGCCC CTCCACGACC TGACGCCAAA
TCGGCGACCT GA
 
Protein sequence
MPRESVSVEG RAEGRDEAVP TVADAPMSEA LFRAARVHRI MAGTLLRDTG LYPGQELLMM 
QLWERGEQRQ ADLIKTLGLD PSTVTKMLQR LEQSGFVTRK PSPHDRRAVV VSATRAGQAL
RGQVRQAWSE LEQVTAAGFT EAEYRQAMRV LTRIETNLTT PPPANDPPTP PTAPPRPDAK
SAT