Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_5319 |
Symbol | |
ID | 5673653 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 6407382 |
End bp | 6408785 |
Gene Length | 1404 bp |
Protein Length | 467 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641244176 |
Product | hypothetical protein |
Protein accession | YP_001509583 |
Protein GI | 158317075 |
COG category | [S] Function unknown |
COG ID | [COG5361] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.138792 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGAGCGG ATGACCAGCG AGTCGGACTT GCCTGCGAGG CATTCTTCTT CGGGTACCCC CTCGTGTGCG CGGTCCGGCA GATCATCAGG ATCGCCCACG ACGGGCTCGG GCCGATCGAG CCGGCCGGCT TCAACGCCTT CGCCCACGAG ACCGACCCGC CCGGTCCGCA CTCACACTTC CTGCACGTCA GCCCGGACGT CCTGGTCTCG CTCGCCCAGG TCGACCTGAG CCCCGGGCCC CTGGTCCTGC ACGTGCCGCC GACCCCCGGG CGCTACCTCG TCCTGGAGCT CTACGACGTG TGGCTGAACG TGTTCGCCTA TCTCGGCACC CGGGTCACCG GGGACGACGG TGGCGACATC CTGCTGCTCC CGCCCGGCAC GGCGGACGCT TCCAGCACGG CGGACGCTTC CAGCACGGCG GACGCTTCCA GCGCGGCGGA CGCTTCCGCG CACGACCGCG TGGTCGAGGC ACCGTCGCGG GTCGTCAGCA TCATCGCCCG GTTCGGCTAC GGCGGGCCGG CGGACCTGCC CGCCGTCCGG GCCCTTCAGG ACACGCTGAC CCTGCGCCCG CCCGACCCGG GCGCGCGGCG GCCGGAGGGG CCACCGGACG GCTCCAAGCG CGTCTGCGAC GACCTGCGCT TCTGGGAGGA GCTGCGAACC TGGATGCACG CCTTCCCCCC ACCGGCCGCG GAACGCGACT ACGCCCGCCG GTTCGAGGCA CTCGGCCTGC TGACGGACCC GTCGCCCTAC ATCGACCCCG ATCCGCGGCT CGCCTGGTCG CTGCGCAGCG GCCTGCGCAC GGGCCGGGAC GAGCTGGAAC GGCTCGCCGC CGCCGGCCGC CGGGCCCATC AGGGCTGGGC CGGCACCCTG CACGAGGCCG ACTACAACCT CGACCGGTTC GGCCCGGGCG TGCTGGACGA CCGGCACTGG GAGATCCCGG ACCGGGCGCA GGCCCGGATC GCCCGTGCGA TGGCAGCGCG CCGGCCGCTC GGCATCGTCC ACGCCTACGA GTCGACGTCG GCGTGCTGCT CGGTGGACGC CGACGGGCGC CACCTCACCG GAGCGCACAG CTACCTGTTC CGCCTCCCGC CACCGGCGGT CGACGCGTTC TGGACGGTCG CGATGTACGA CGAGCCCGAG GGCTACCTCG TCGACAATCC CCTGCACCGG TACGCGATCG ACAGCCGGGA CGATCTCGTC CACGCCGCCG ACGGAACCGT CCCGATACTG ATCCAAAGTG ACGCTCCGGC AACGGAGACC GCGACGGACG CCGGTGCGGT GATGCCGGCG AACTGGCTGC CGGCCGCCGC GGGTGACTTC CGGCTGGTGC TGCGGATGTA CCTGCCCGGC AAGGAGGTAC TCAGCGGCAC CTACGCCCCG CCACCGATCC ACCGACTGGC CTGA
|
Protein sequence | MRADDQRVGL ACEAFFFGYP LVCAVRQIIR IAHDGLGPIE PAGFNAFAHE TDPPGPHSHF LHVSPDVLVS LAQVDLSPGP LVLHVPPTPG RYLVLELYDV WLNVFAYLGT RVTGDDGGDI LLLPPGTADA SSTADASSTA DASSAADASA HDRVVEAPSR VVSIIARFGY GGPADLPAVR ALQDTLTLRP PDPGARRPEG PPDGSKRVCD DLRFWEELRT WMHAFPPPAA ERDYARRFEA LGLLTDPSPY IDPDPRLAWS LRSGLRTGRD ELERLAAAGR RAHQGWAGTL HEADYNLDRF GPGVLDDRHW EIPDRAQARI ARAMAARRPL GIVHAYESTS ACCSVDADGR HLTGAHSYLF RLPPPAVDAF WTVAMYDEPE GYLVDNPLHR YAIDSRDDLV HAADGTVPIL IQSDAPATET ATDAGAVMPA NWLPAAAGDF RLVLRMYLPG KEVLSGTYAP PPIHRLA
|
| |