Gene Franean1_5296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5296 
Symbol 
ID5673630 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp6371098 
End bp6371883 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content73% 
IMG OID641244153 
Producthypothetical protein 
Protein accessionYP_001509560 
Protein GI158317052 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGACG CCTTCCGCTC CGAGTGGGTA CCGCTGCTGC GCCGGCGGTT CCTGGTCGGC 
ACTCTCGTCG CCGTCGCGGC CGTCGCCGCG CTGGGCACGG CGCTGACGAT CTTCTCGGCG
GGCCGCACCG ACTTCGACGG CGATCCGGTG TCGGTCGCGA TGCTCGCCGC GCCGTCCGGG
GTCATCGAGG GCCTGGAGGC GGTGACGATC CTGCTGGGTG TGGTGGCGCT GTCCGTCACC
GCCTCGGCGA TCGCCGGCGA GTACTCCCAT GGGACGCTAC GCAACCAGCT CGTCGCGCAG
CCGCACCGGT TGCGGCTGCT GGCCGGCAAG GTGCTGGCGC TGGTGGTCTT CCTCGTGCTC
GTGGTCACCG TGTCCGCGCT GGTCACGGTG GGGCTGTCGT TCGCCCTGGC GCCGTTGAAC
AACATCCCGA CCGACGCGTG GCTGTCCCTT TCCGGGCTGG CCGAGTTCGG GAAGGGCCTG
GCCAACGTGA CGTTCGGCAC CCTCGGCTAC GCCGCCGTCG GGGCGCTCGC GGCCGTGGTG
CTGCGTTCCC CCGCCGCGGC GATCGCGGTC GGGGTCGCCT ACGCCCTGCC GGTCGAGATG
CTGGTGTCCC GGATCTACGC CCCGGCCGGT GGGTGGCTGC CGGCGCACCT GATGGAGATC
GTGGCCGTCG GCGGCAACGG GTACACGACC GCGTACTCCG CCGCGGGCGT GCGGGTGCTG
GTGTTCTGCG GGCTGGCCGC GGCGGTCACG GCGGTGCTGT TCCGCCGCCG GGACGTCACC
GCCTGA
 
Protein sequence
MIDAFRSEWV PLLRRRFLVG TLVAVAAVAA LGTALTIFSA GRTDFDGDPV SVAMLAAPSG 
VIEGLEAVTI LLGVVALSVT ASAIAGEYSH GTLRNQLVAQ PHRLRLLAGK VLALVVFLVL
VVTVSALVTV GLSFALAPLN NIPTDAWLSL SGLAEFGKGL ANVTFGTLGY AAVGALAAVV
LRSPAAAIAV GVAYALPVEM LVSRIYAPAG GWLPAHLMEI VAVGGNGYTT AYSAAGVRVL
VFCGLAAAVT AVLFRRRDVT A