Gene Franean1_5291 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_5291 
Symbol 
ID5673625 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp6364901 
End bp6365500 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content73% 
IMG OID641244148 
Productheat shock protein Hsp20 
Protein accessionYP_001509555 
Protein GI158317047 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0071] Molecular chaperone (small heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.060881 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.828695 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCT ACCTGTGGGA CCCGTTCGCC GCGTTCGAGC GCATGGACCG TGAGTTCAAC 
GAGATCGTCC GGCGGTCGTG GGGCTCGCGG GAGCGCACCG TGCGCCCGCT GCGCGCGACG
AACCGTCCGC AGAGCGTCGT GCCGAGCGCC GATGTCCTGG TCGACGGGGA CGACGTTCTG
ATCAATCTCG AGCTGCCCGG TGTCGACGTC GAGAAGGACG TGACGGTGGA GATCGACCGC
GGGGCGCTCG TCGTCCGCGG TGAGCGTTCG TCCACCCAGG AGAAGACGGT CAACGGCCGG
GTACACCGCG AGCGGTGGCA CGGGTCGTTC CGCCGGGAGT TCGCCCTTCC GGAGAACGTC
GACGCGACCG GGATCAGCGC GCGCTACGAC CGCGGTGTGC TGACCGTCCG GCTGGCGGGA
GCGGCGGCGG CGCCGCGCAG CACGCGGATC CCGGTCAGCG CCTCCCCGGC GGCGGCGCAG
CTGCCCACGG CGGAGGGGAG CGCCGGCACG GAGAACAGCG CCAGCGCCCA GAACAACTCC
GTCGCCGAGA GTGGTGCCCT GCGTGACGGC GGCGCGGCGG CCGAGTCGCC CGCGTCCTGA
 
Protein sequence
MSTYLWDPFA AFERMDREFN EIVRRSWGSR ERTVRPLRAT NRPQSVVPSA DVLVDGDDVL 
INLELPGVDV EKDVTVEIDR GALVVRGERS STQEKTVNGR VHRERWHGSF RREFALPENV
DATGISARYD RGVLTVRLAG AAAAPRSTRI PVSASPAAAQ LPTAEGSAGT ENSASAQNNS
VAESGALRDG GAAAESPAS