| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5283 |
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| Symbol | |
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| ID | 5673617 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 6355295 |
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| End bp | 6356842 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 641244140 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001509547 |
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| Protein GI | 158317039 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.280334 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.245344 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGGTG GGCCACGAGG GCAGGGCGGG CCACGAGGGT CAGCAGGGAC ATCCGCGGGA
ACCGGTCCGG GCGGGCCACA GACCGCCTCG CTGACCCACG GCGCCGTCGG ACGTCTGGTG
GTCGCCCTCG GCACGGCCAC GCTGCTGCAG TGGCTCGGGG CGTTCGCGAT CGCGCCGATC
CTCCCGCTCT ACCTGGAGGA ACGGGACGTC TCCGCCGGCG GGGTCGGCAT GGTCATGGCC
GCGTTCTTCC TCGGCGCGCT GCTCTCCCAA TACCCCGCGG GCCTGGCCAC CACGACGCGG
GGGCACCGCC CGGTGCTGGT CGCGGGGCTC GTCGCCTACG CCGTGGGGTG CGCCGGGCTG
ATCGTCTCCC CGGGGATCAT GTGTGACACG GCGATGCGGG TGCTGCAGGG GGCCGGGGCC
GGGGCGTTCG AGGTGGCCGT GCTCACCGCG ATCGCCGCGA CCGTGCCGCC GGACCTCACC
GGCCGGGCCG TCAGCGCCGT CTACACCGGT CAGATCGCCG GCACCGCCAT CGGTCCGCTG
CTCGGCGGGC TGGCAGGCGA GCAGCGGATG GACCTGCTCT TCCTAGGCGC AGGGGTGGCC
GCGGCGGTCG CCTCCGTCCC GGTGCTCGTC CTGCTCCGAC CGGACGGCCC CGGTCACGCG
CCGGCGCTGT CTGTGGCCTC TACCGGCTCC GACGCCTCCG CTGTCGGTCC CACCGCGGGT
GGGGGTGCGG GCGTCCCCGG TGGGCGGGCG GGCGGCGCGG AGGCGGTCGC GGCCGTGGCG
GCAGTCGCCG TGCACCGCGA CGGTTCCCCT GGTCATGCCG GCCGGCGGGC TCCCGCGTGG
GCGTCCCGGC GGCGAACGTG GTCACCCCTC GCCGCGGTGG GGCCGGGGGT CGAGGGGCTG
CTGCTGGTCG CCGCGGTGAA CGGCCTGGCC GTCGGGACCT ACGAGACCTG CTGGAGCCTC
CTGCTGACCG ACCGGGGCAT CTCGACGGAG CTGGTCGGGC TCAGTTTCAC TCTGTTCTCG
CTGCCCTACA TCGTCTGCGC CATGCCCGCG GGCTGGCTCG CCGACCACAA CGACCGCCGA
TGGCTGGTGG TGGCGGCCAC GGCCACGACG GGTGTCACCG TCGCCACCTA CTCGTTCATC
GGGTCGTTCT GGCTGATCGT CCTCGTGAGC TGTGCCGAGG CGATCGCGCT GGCCGTGAGC
TTCCCATCCG CCCAGTCGCT GCTGGCGCAG GAGTCCGGGC CCGGTGGTGC CGGGCGGGCG
CAGGGCCTGT TCACGACGAC CCAGACCGCC GCGACGGCCG GGGCGGCGCT GACGTCGGGC
GCCCTGTACG CGGCGAACGC ACACCTCCCG TTCGTGCTGA CGGCCGTCGC GGCGCTCGCC
GTCGCCGGTT CGCTGCCGCG GCTGTGGCGC AGGGTGCGGG GGACCGTGGT GCCCGCCGCC
GTGCCGTCCG GGGCCGTGCC GTCCGGGGCC GTGCCGGCGG GGGCCGTGCC GGCGGCGAGC
ACGGGACCCG CCGGCGGGGC GTTCGCCAGC CACCTGATCA CCCGGTAA
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| Protein sequence | MPGGPRGQGG PRGSAGTSAG TGPGGPQTAS LTHGAVGRLV VALGTATLLQ WLGAFAIAPI
LPLYLEERDV SAGGVGMVMA AFFLGALLSQ YPAGLATTTR GHRPVLVAGL VAYAVGCAGL
IVSPGIMCDT AMRVLQGAGA GAFEVAVLTA IAATVPPDLT GRAVSAVYTG QIAGTAIGPL
LGGLAGEQRM DLLFLGAGVA AAVASVPVLV LLRPDGPGHA PALSVASTGS DASAVGPTAG
GGAGVPGGRA GGAEAVAAVA AVAVHRDGSP GHAGRRAPAW ASRRRTWSPL AAVGPGVEGL
LLVAAVNGLA VGTYETCWSL LLTDRGISTE LVGLSFTLFS LPYIVCAMPA GWLADHNDRR
WLVVAATATT GVTVATYSFI GSFWLIVLVS CAEAIALAVS FPSAQSLLAQ ESGPGGAGRA
QGLFTTTQTA ATAGAALTSG ALYAANAHLP FVLTAVAALA VAGSLPRLWR RVRGTVVPAA
VPSGAVPSGA VPAGAVPAAS TGPAGGAFAS HLITR
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