| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4999 |
|---|
| Symbol | |
|---|
| ID | 5673338 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 5995555 |
|---|
| End bp | 5996406 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 641243853 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001509269 |
|---|
| Protein GI | 158316761 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3879] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCGGCG AGCTGCCGCC CCGCGCTCCT CGGCTCCACG TGCCGCCGCC CGGCGAGTCG
CCTCCCGGTG AGCTGCCGCT CGGGGAGCCG CCGGACACCA CGGGGCCGGC CGGCGGCGGC
CCCGCTGTCG TGCGCCCGAC TGTCGGGAAG GCGACGAGCG GCGGCCCCGG CTCCCGGGTG
CGGCTGTTGC GATACGTGAC GGTTCTGTTG CTCGCGGTCC TGGGATTCGG TGTCGCCGTG
ATGATCCGGA TCGCCGACAC GCCCGAGCGG CTGGCGGCGG CCCGGCCCGA CGAGCTCGCC
ACCGAGCTGG AGGACCTCGC CGTCGCCGGG CGGCGGCTGG AGGTGGAGGC CACCGGTCTC
GAGCAGACCC GCGCCGCGGT CGCCGACGGC GCGCGCGGCG ACGCCGACCT CGACCGGGCC
CGCCGCGAGG CCGAGGCCCT GGCAGTGCTC GCCGGCACCG GCCCGGCGAC CGGGCCGGGC
GTCACCCTCC GCATCGACGA CCCGCGGGGG ACCGTAGAGG CGTGGATCCT CGTCGACGCC
CTGCAGGAGC TGCGGGACGC CGGTGCCGAG GCGATCGAGC TCTCCGGTGT CCGTGTCGTG
GCCTCCACCT ACATCGTCGA CGCTCCCGGC GGCGGTATGA CCGTGGACGG CGGCAGTGTC
ACGCCGCCCT ACGAGCTGCG CGTGGTCGGG GACGCGCACA CGCTTGCCCA GGCAATGCGG
ATTCCTGGCG GAGTGCTCGA TACGGTAGCT ACCCGGGATG GCGCGCATGC TGAGGTCACG
AACTCGGATC GGATCGAGAT CAGGGCGCTG CGGGCCGTTC CGACCCCCCG TTTTGCCCGT
CCAGCCGGTT GA
|
|---|
| Protein sequence | MTGELPPRAP RLHVPPPGES PPGELPLGEP PDTTGPAGGG PAVVRPTVGK ATSGGPGSRV
RLLRYVTVLL LAVLGFGVAV MIRIADTPER LAAARPDELA TELEDLAVAG RRLEVEATGL
EQTRAAVADG ARGDADLDRA RREAEALAVL AGTGPATGPG VTLRIDDPRG TVEAWILVDA
LQELRDAGAE AIELSGVRVV ASTYIVDAPG GGMTVDGGSV TPPYELRVVG DAHTLAQAMR
IPGGVLDTVA TRDGAHAEVT NSDRIEIRAL RAVPTPRFAR PAG
|
|---|
| |