Gene Franean1_4883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4883 
Symbol 
ID5673223 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp5858434 
End bp5858757 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content67% 
IMG OID641243738 
Producthypothetical protein 
Protein accessionYP_001509154 
Protein GI158316646 
COG category[C] Energy production and conversion 
COG ID[COG1141] Ferredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.190233 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.299907 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGACAG AAGATCGGAG CCCTGTGGCA ACACCAACGA AGCCGGGCGA TTCGCCCGGA 
CTCCGGGTCC GCATCGACCA GGACTCCTGC ACCGGCGACG GTCTGTGCGT CCAGTATGCA
CCCTCGGTGT TCGAGTTCGA CATCGACGGG CTCGCCTACG TGAAGAACTC CGACGGTGAG
CTTCAGACCA CACCGGGGAC CCACGTGCCG GTTCCGCTGC CGCTGCTCAC AGAGATCCGC
GACGCCGCCG AGCAGTGCCC CGGCACCTGC ATCTACGTCG AGCACCCGGA CGGGACGCTG
GAGGTCGGCG GCCCACAGGA GTGA
 
Protein sequence
MVTEDRSPVA TPTKPGDSPG LRVRIDQDSC TGDGLCVQYA PSVFEFDIDG LAYVKNSDGE 
LQTTPGTHVP VPLPLLTEIR DAAEQCPGTC IYVEHPDGTL EVGGPQE