Gene Franean1_4762 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4762 
Symbol 
ID5673104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp5687555 
End bp5689582 
Gene Length2028 bp 
Protein Length675 aa 
Translation table11 
GC content74% 
IMG OID641243619 
Productputative ATP/GTP binding protein 
Protein accessionYP_001509035 
Protein GI158316527 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTCGCGC TGGTGGTGAC GGTGGTGCTG GTGCGCCGGT ACGACTGGGA ACCGGCCGGC 
ACGATACTGG CGGTGATCAC ACCGGCGTTG ACGATCGCGC TGCTGGCCTA CGGGACGCCG
CTGGTGTTCA CCCGCCCGCC GTCCCCCGAA CCCGACCCGG CAGGCGCGGG CCCACCGCCG
CGGGTGGACG GCCCGCCGGT CGGGGCTCTG CCGGCACGGA ACCGGCTGTT CACCGGCCGG
GCGGGGCAGC TGGAACGGAT CCGCCGGCAA CTTCAGGCCG GTCCGGTCGC GGTCACCGCC
CTACACGGGA TGGGCGGGGT CGGGAAGACC CAGCTCGCGC TCGAGTACGC CCACCGCCAC
ACCGGCGACT ACACCCTGAT CTGGTGGATC GACGCCGAAC AGACCACACT GCTCGCCGAG
AAGATCGCCA CGTTGGCCAG GCCACTGGGC CTACCCACCA CCACCGTTCC CGAGACCGCG
TCAGGGGTGC TGGCAGCACT CGCCCGCCGG CCGGGGTGGC TGGTGGTGTT CGACAACGCC
GAGCACCCCA CCGCGCTGGC CCCCTGGCTG CCCACCGGCC CCGGCCACGT GCTGATCACC
TCACGCAACC CGGCCTGGGA GCATCTGGCC GCCACCGTCG ACGTCGACCT GCTCCCCCGC
CCCGAGTCCG TCGCGCTCCT CACCCACCAG CTCCCCGGCC TGGACCCGGC CGTCGCCGGC
GCGCTCGCCG ACGAACTCGG GGACCTGCCA CTCGCCCTCG CCCAAGCCGG CGCCTACCTG
GCCCGCACCC GCACCCCTCC ACGCGACTAC CTCGCCCAGT TCCGGGCGCG GCGCGCCGAA
TACCTGGCCA CCGGAGACCC CCCGCTCTAC GCCGGCCGTC TCGACACCTG CTGGTCACTC
TCCCTGCAAC GCCTGGCCGC CGACGCCCCC GCTGCGGTCT GGCTGCTCCA GGCCTGCGCG
CTGCTCGCCC CCGACCCGAT CCCGCTGGCG CTGTTCCCCA CCCTGCCCCT CCGGCGGCGC
CGCTGGTGGC ACCGCCGACA CCCGCCGGCA GCCGGCCAGG ATGTGCGGGA GGCGGTCGCC
GCGGCCGCGG ACTACTCCCT GCTCCGCCAC CACGACAGCG ACGGCACGCT CACCGTGCAC
CGTCTCGTCC AAGCCGTCAT CGCCGGCCAG CTCACCGACG CCCAGCGCCG CACCCTCACC
GACACCACCA CCCGGCTCCT CACCGCCGCC ACCCCCACCC ACCAGGCGGA CGATCCCCGC
AGCTGGCCGG CCTGGACCGC CCTCGGCCCC CACCTCCTGC ACGCCCACAG CCAGCTGACC
GGCCCCGACG ACCCCCACCA CCTCCGCACC ACTACCGACC AGTTCTGCTA CCAGCTCTAC
GCCCGCGGTG ACTACACCGC CGCCAACACC CTCGCCCTAC GCCTACACCG CGACGCCCTC
CACCACCACA GCCCCGACCA CCCCACCACC CTCGCCGCCG CCCACACCCT CGCCACCACC
TACAACGCCC TCGGACACCA CCAGGCCGCC CGACAGCTGG CCCAGGACAC GTTGGCCCGC
CAGCGGCGGG TCCTCGGCGA CAACCACCCC CGCACCCTGA CCTCAGCTAA CAACCTCGCC
GCCCAGATGT ACGCGATGGG GGAGCACCAG GCCGCCCGAC AGCTGGCCCA GGACACGTTG
GCCCGCCAGC GGCGGGTCCT CGGCAACGAC CACCCCCGCA CCCTGACCTC AGCTAACAAC
CTCGCCACCT ACCTGTCCGC GATGGGGGAG CACCAGGCCG CCCGTCAGCT GGACGAGGAC
ACGTTGGCCC GCCGGCGGCG GGTCCTCGGC GACAACCACC CCAACACTCT GACCTCGGCG
GGCAACCTCG CCGGCCGGCT GGGCGTGCTG GGGGAGCACC AGGCAGCCCG ACAGCTGGCC
CAGGACACGT TGGCCCGCCA GCGGCGGGTC CTCGGCGACA ACCACCCCAA CACACAGCAG
ACCGAGCGGC TTGTCAGCTG GATCGACGAG CAGGCTTCCC GCGGGTAG
 
Protein sequence
MVALVVTVVL VRRYDWEPAG TILAVITPAL TIALLAYGTP LVFTRPPSPE PDPAGAGPPP 
RVDGPPVGAL PARNRLFTGR AGQLERIRRQ LQAGPVAVTA LHGMGGVGKT QLALEYAHRH
TGDYTLIWWI DAEQTTLLAE KIATLARPLG LPTTTVPETA SGVLAALARR PGWLVVFDNA
EHPTALAPWL PTGPGHVLIT SRNPAWEHLA ATVDVDLLPR PESVALLTHQ LPGLDPAVAG
ALADELGDLP LALAQAGAYL ARTRTPPRDY LAQFRARRAE YLATGDPPLY AGRLDTCWSL
SLQRLAADAP AAVWLLQACA LLAPDPIPLA LFPTLPLRRR RWWHRRHPPA AGQDVREAVA
AAADYSLLRH HDSDGTLTVH RLVQAVIAGQ LTDAQRRTLT DTTTRLLTAA TPTHQADDPR
SWPAWTALGP HLLHAHSQLT GPDDPHHLRT TTDQFCYQLY ARGDYTAANT LALRLHRDAL
HHHSPDHPTT LAAAHTLATT YNALGHHQAA RQLAQDTLAR QRRVLGDNHP RTLTSANNLA
AQMYAMGEHQ AARQLAQDTL ARQRRVLGND HPRTLTSANN LATYLSAMGE HQAARQLDED
TLARRRRVLG DNHPNTLTSA GNLAGRLGVL GEHQAARQLA QDTLARQRRV LGDNHPNTQQ
TERLVSWIDE QASRG