| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4486 |
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| Symbol | |
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| ID | 5672836 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 5351760 |
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| End bp | 5353745 |
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| Gene Length | 1986 bp |
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| Protein Length | 661 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641243353 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_001508769 |
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| Protein GI | 158316261 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components
[COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACT TTCTGCTCTA CGTTCTTCTC GGTCTCGGGC CGGGCGCGGT CTACGCGGCC
CTCGGTCTCG GCGTGGTGCT GACCTACCGG AGCTCGGGGA CGATCAACCT CGCCTACGGT
GCCGCCGCGC TCTACCCCGC GTATGTCTTC GCACAGCTCA ACAAGACCGG TGAGCTGATC
CTCCCGATTC CCGGCGTCCC ACCGATCTAC TTCGGAGGCG TGCCCTCGAA GGCGGTGGCG
CTCGTGGTGG CGTTGCTCGT AGCGGCGCTG CTCGGTGTGC TGATACACCT CCTCGTGTTC
CGGCCGTTGG CCACGGAGCC CGCGCTCGCG CGGGTCGTGG CCTCCATCGG TGTGCTGATC
ACCATCCAAG CGATCGTGAT CATCCGGTTC GACGAGCAGG CTCTGCAGCC GGTCGGTCTC
CTCCCGGACG ACGCCGTCAA CCTCGGTGAC ATCACCGTGC CCGCGGACAG GCTGCTGCTC
GGCCTGCTCG TGGTGCTCGT CTGCGCTGTG CTGGCGGCGG TCTACCGCTT CACCAGTTTC
GGGCTGGCCT CCCGGGCGGC GGCGACCAAC CCGAAGGGCG CCACCCTGCT CGGTTACTCC
ACCGACAGCC TGGCGTTGGT CAACTCGACG ATCGCGGCCG TGCTGGCCGG CCTGTTCGGG
ATCCTGGTGG CGCCGATCAC CAGTTTGCAG CCCACCACCC TGACCCTGTT GATCGTGCCC
GCGCTGGCCG CCGCCCTGAT CGGCCGGTTC ACCTCGTTCG GTGTCACCGT GGCCGCGGCC
CTGGTCGTCG GCATCCTGCA GTCGCAGATC GTGCTGCTCC AGGGCAAGCT CGAGTGGCTG
CCGCGGGCCG GCCTGGGTGA CGCCCTGCCG TTCGCGGTGA TCGTGATCGC CATGTTCGCG
GTGGGGGCGC GGCTTCCCGG TCGCGGCGCG GCGAGCAACG AGCGGATGCC GACCGCGCCG
CCACCGAGGC ACCGATGGTC GGTGGGGCTC CCCGCCGTGG CGGTGGGCTG CGCGATCGTG
TACGTCCTCA GCGACGCCTA CCTCGGCAGC TACGTCACCT CGTTGATCGC GGGGCTGGTC
TGCCTGTCAT TCGTCGTGCT GACCGGCTAC ACGGGCCAGG TCTCACTGGC CCAGATGGCG
ATCGCGGGCG TGTCGGCGTT CGGGCTGAGC AAGTTCGCCC ACGGGATCGG GATTCCGTTC
CCGCTGGCGC CGCTGCTCGC CATCGGCGGC GCGGTGCTCG GCGCCCTCGC GGTCGGCATC
CCGGCCCTAC GGGTACGTGG GGTGCACCTA GCCGTCGTGA CGATCGCGCT GGCGGTCGCC
GTCGCGTCCG CCGTCTTCGG CAACCCGGCC GTGACGGGCG GCACGAGCGG TAGCCCGGTA
CCCACCCTGT CGATCTTCGG CTTCGATTTC CGCGGTGGGG AGACCGGGTT CGCGGTGGTG
ACGGTGCTGG TCCTCGCCGT TGCGGGGTTC GCGGTGGCGA ACCTGCGGCT CAGCCCGGTC
GGGCTGCAGA TGCTCGCGGT ACGCGCCAAC GAGCGGGCGG CGGCCTCGGT CGGCATCAAC
GTCGCCCGCA TGAAGCTGCT CGCCTTCGCG TTCTCGGGAG TGCTCTCGGG CACGGCGGGC
GTCATGCTCG CCTACAACCA GAGCAACGTG TCGTTCCAGT CGTTCGGTGC GATCGCGTCG
CTGTCGTTCC TCGCGGTGGC CTACCTGGGC GGGATCACCA CGATCTCCGG CGCAGTTGTC
GGCGGCATGC TGGTGAACGG CGGGCTGATG ACCCTGGCCC TGCAGAACTG GTTCGAGATC
GGCTCGTACC AGTTGCTGGT GAGCGGCGTC GGTCTGATCG TCACCGCGGT ACTCAACCCG
CAGGGCATCA GCGGCGCGAC CCAGCAGAGT GCCGCGAAGC TCCTCGCCGC CATCCGACGG
CGGGGCCATC CGAGCCCGTC CGAACTCGGG AAACCCCCAG CCGTGCCGTC CGGAGTCGCA
TCATGA
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| Protein sequence | MTDFLLYVLL GLGPGAVYAA LGLGVVLTYR SSGTINLAYG AAALYPAYVF AQLNKTGELI
LPIPGVPPIY FGGVPSKAVA LVVALLVAAL LGVLIHLLVF RPLATEPALA RVVASIGVLI
TIQAIVIIRF DEQALQPVGL LPDDAVNLGD ITVPADRLLL GLLVVLVCAV LAAVYRFTSF
GLASRAAATN PKGATLLGYS TDSLALVNST IAAVLAGLFG ILVAPITSLQ PTTLTLLIVP
ALAAALIGRF TSFGVTVAAA LVVGILQSQI VLLQGKLEWL PRAGLGDALP FAVIVIAMFA
VGARLPGRGA ASNERMPTAP PPRHRWSVGL PAVAVGCAIV YVLSDAYLGS YVTSLIAGLV
CLSFVVLTGY TGQVSLAQMA IAGVSAFGLS KFAHGIGIPF PLAPLLAIGG AVLGALAVGI
PALRVRGVHL AVVTIALAVA VASAVFGNPA VTGGTSGSPV PTLSIFGFDF RGGETGFAVV
TVLVLAVAGF AVANLRLSPV GLQMLAVRAN ERAAASVGIN VARMKLLAFA FSGVLSGTAG
VMLAYNQSNV SFQSFGAIAS LSFLAVAYLG GITTISGAVV GGMLVNGGLM TLALQNWFEI
GSYQLLVSGV GLIVTAVLNP QGISGATQQS AAKLLAAIRR RGHPSPSELG KPPAVPSGVA
S
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