| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4448 |
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| Symbol | |
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| ID | 5675735 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 5312886 |
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| End bp | 5313707 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641243316 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001508732 |
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| Protein GI | 158316224 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGACGTG TCGAAGGCAA GGTCGCGGTA ATCACCGGTG CCGCGCGGGG GCTAGGCCGC
GCATCCGCGC TGCGGCTGGC CGAGGAGGGG GCCGACATCA TCGCGCTTGA CCTTGCGGCC
GATCCGGGGT TAACCAGCTA CGCGATGAGC GGAGCCAATG ACCTCGAATG CACGGCTGAG
GCGTTGCGGT CGCTCGGCCG CCGCGTGGTC ACCGGATACG CGGACGTCCG GGACCTGGAC
GCAGTCGTGG CCTCGATCGA GGCCGGGGTC CGCGAGCTGG GGCGGCTCGA TCTGGTTTGC
GCCAACGCGG GAATGGTCTC CTACGGCGGC GTGCTTGACC TCACCGAGAC GCAGTGGCGG
GACCTGCTCG ACGTGCACAT CACCGGCTCC TGGCACACCG TGCGTGCCTC CGCACCCCAT
CTCATCGCCG CCGGCGGTGG GTCCATCGTG CTCACCAGTT CAGTGGCGGG GCTGCGGGCC
GAGGCCGGCG TCGCCCACTA CGTCACGGCT AAGCATGGGC TGGTGGGGCT GATGCGCAAC
CTGGCTGTCG AGCTCGCTCC ACACGGCATC CGGGCCAACT CCGTGCATCC CACGATGACG
AAGACAAGGA TGATCACGAA CGAGTCGACC CAGGCTCTGA TCGCCTCGGG AGCCGAGGCC
GGGATCAGTG CCGAGGACGC CGCTCGAAAG CGCCACCTGC TCGACGTGCC GTGGATCGAG
GCTATCGACG TCGCCAACGC CGTGCTCTAC CTGCACTCGG ACGAAGCGCG CTACATCACC
GGAGTCGCAC TACCGGTGGA CGCCGGGGCT TGCCTTGTCT GA
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| Protein sequence | MGRVEGKVAV ITGAARGLGR ASALRLAEEG ADIIALDLAA DPGLTSYAMS GANDLECTAE
ALRSLGRRVV TGYADVRDLD AVVASIEAGV RELGRLDLVC ANAGMVSYGG VLDLTETQWR
DLLDVHITGS WHTVRASAPH LIAAGGGSIV LTSSVAGLRA EAGVAHYVTA KHGLVGLMRN
LAVELAPHGI RANSVHPTMT KTRMITNEST QALIASGAEA GISAEDAARK RHLLDVPWIE
AIDVANAVLY LHSDEARYIT GVALPVDAGA CLV
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