Gene Franean1_4204 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4204 
Symbol 
ID5672559 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp5007713 
End bp5008189 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content71% 
IMG OID641243077 
ProductMarR family transcriptional regulator 
Protein accessionYP_001508494 
Protein GI158315986 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.880784 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCACGACA GTCTGCGCGA CCTGGAGCGG GAGCTGATGC TGCTCGCCAG GCACCACATC 
GCGCCCAACG CCGCGAGGCG CGGGCGAACG CGTCACCTCG ACCGCTCCGC CTATCTCCTC
CTCAGCCGCC TCGAGGCCCA GGGCCCGATG ACCATCGGCC AGCTCGCCGA GGCCTTCTCC
CTCGACGTCT CCACGGTCAA CCGCCAGACC GCCGCGGTCC TCCAGGCCGG CCTGGCCGAG
CGCATCCCCG ACCCCGACGG CGGCCTCGCC CGCAAGCTGA GCATCACCCC CGAGGGAGCC
CGCCGCGTCG CCGACGACCG CGCCTTCGTC ATCGGCGAGC TGAGCGGCCT GGTCTCCACC
TGGTCGGAGG ACGAGTTACG CCTGTTCGCC AGCATGCTCG AGCGCTTAAA CACAAGCATC
GAAACCAAGG ACGGCCAGCG CCCCTGGCCA CGCTCCGCTT CCGTCCCCGG CCGCTGA
 
Protein sequence
MHDSLRDLER ELMLLARHHI APNAARRGRT RHLDRSAYLL LSRLEAQGPM TIGQLAEAFS 
LDVSTVNRQT AAVLQAGLAE RIPDPDGGLA RKLSITPEGA RRVADDRAFV IGELSGLVST
WSEDELRLFA SMLERLNTSI ETKDGQRPWP RSASVPGR