Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_4188 |
Symbol | |
ID | 5672543 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 4981543 |
End bp | 4982187 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 641243061 |
Product | hypothetical protein |
Protein accession | YP_001508478 |
Protein GI | 158315970 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00904545 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGGCGGA CGCGGGCAGG TGGCAGCGGA TCGTTCCCGG GCTGCGCGGG CAGGTGCGTC CACTCGCCGG ACCGGCGGCG CGGTTCCTCG TCACCGCCGT GGACGAGTTC GAGCGCACCT GGAGCTGGCG GGTCGGGATC GGCCCGCTGC GGCTGGACCT CGACCACGGC GTGGACGCCT GCCTCGACGG CGGCACGTCC ACCTGGCTGC GGATCACCGG ACCGGGCCCG TTGCCCCACG CCTACGCCCC ACTGGCCCGG GTCGCGTTAC GCCGCATCGT CCGCTGACCC GGCACGAGGC GTCCCACACT TGTTCGTCCT CGCCATGACC TGGCTGTCGG TGGCGCTCGG CCTGCTGGCC GGCAGCCCAC AGGCCGCCAG CGGGTTCACT TTCTTCGTGC TGTTCCTGCC GTACCTGAGC AGCGCGTTCG TGCCGACGGG GACGATGCCG GCCCCGCTGC GGGCGGTCGC CGACCACCAG CCGGTCACCC CGGTGATCGA GACGCTGCGC GGCCTGCTGA TGGGAACGCC GATCGGGACG GGCGGGTGGC TGGCGCTGGC CTGGTTCGGC CCGGTGCTGG CCGGGTCATA CCTGGCGGCG AAGTTCCTGT TCGGACGGCG TGCGTTCACC GGGCGGGCGG GCTGA
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Protein sequence | MGRTRAGGSG SFPGCAGRCV HSPDRRRGSS SPPWTSSSAP GAGGSGSARC GWTSTTAWTP ASTAARPPGC GSPDRARCPT PTPHWPGSRY AASSADPARG VPHLFVLAMT WLSVALGLLA GSPQAASGFT FFVLFLPYLS SAFVPTGTMP APLRAVADHQ PVTPVIETLR GLLMGTPIGT GGWLALAWFG PVLAGSYLAA KFLFGRRAFT GRAG
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