| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4180 |
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| Symbol | |
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| ID | 5672535 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 4970670 |
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| End bp | 4972049 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641243053 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_001508470 |
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| Protein GI | 158315962 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.875127 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.262975 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCCGAG GCATCGACAC CGGTCATGAG AAGCAGGCGG CCGGAGAGCG GACGACCGGC
GACGAGAGCG GGGTCGACCC CCGGACCGAC CCGCGGGCCG ACACGGGGCC GGTGCTGGCC
CGCACGATCG GCACCGGGGA CGCGGTTGTC ATCGGGCTGG GCGCGATGCT CGGCGCCGGC
GTGTTCGCCG CGTTCGCTCC CGCGGCCCGG GCCGCGGGAG CGGCACTCCT GTTCGCCCTT
GCCACCGCGG CGATCGTGGC CTACTGCAAC GCCACCTCCT CGGCCCGGCT GGCGGCGCTG
TACCCGCAGG CCGGCGGCAC CTACGTCTAC GGCCGGCGGC GTCTCGGCGA CTTCTGGGGC
TACCTCGCCG GCGCCTCGTT CATCACCGGC AAGACCGCGT CGTGCGCCGC GATGGCTCTC
ACCGTCGGCG CCTACACCTG GCCTGGACAT GAGCGTCTGG TGGCGGGCAC CGCCACGGCC
GCCCTCACCG CGGTCAACTA CTCCGGGATG CGGCGCGCGG CCTGGCTGAC CCGTCTGATC
GTCGTCGTCG TCCTGACCGT GCTCGTCGTG GTCGTGGTCG TCTGCGTCAC CAGTGGCGCC
GCGGAGCCGG TCCGCCTCTC CCCCACCGGC CGCGACGGCC CGGCGGGGCC GGCATCGCCC
AGCCTGTGGC CCGGTCTCCC GCAGGCCGCC GGCCTGCTGT TCTTCGCCTT CGCCGGCTAT
GCGCGCATCG CGACGCTCGG CGAGGAGGTC CGTGACCCGC GGCGCACCAT CCGCCGGGCG
ATCCCGACCG CGCTGGGCAT CACGCTGGTC GTCTACGCCG CGGTCGCCGT CGCGTTGCTG
CTGGTGCTAC CGGTGGCCGC GCTCGGGGCG TCAGCCGCGC CGCTCACCGA CGCCGTGCGT
GCCGCCGGCA TGCCGGGTCT GGCTCCGGTG GTGCGGGTCG GGGCGGCCGT CGGTGCGCTC
GGGTCGTTGC TGGCGCTGAT CCTCGGTGTC TCGCGTACCA CCCTGGCGAT GGCCCGGGAC
GGCCATCTGC CGACGCCGCT GGCCGCCGTT CACCCCCGGT TCGGGGTTCC GCATCGCGCC
GAGCTCACCG TCGGGGCCGC CGTCACCGCG CTCGTGCTCA CCACGGACCT GCGCGGCGCG
ATCGGGTTCT CCTCGTTCGG GGTGCTGCTG TACTACGCGG TCGCCAACGC CGCGGCGTGG
ACCCTCTCCC CCACCGAAGG CCGTCCGGTG CGCGCCGTTC CGGTCGTCGG ACTGCTCGGC
TGCCTACTGC TGGCCTTCAG CCTGCCCGGG ACGTCCGTGC TCGGCGGGTC CGCGGTACTC
GCCGCGGCGG CCGTGGTGTA CGCCGCCCGT CACGCGGGCG GGCACCCGGC GCGGCAGTGA
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| Protein sequence | MVRGIDTGHE KQAAGERTTG DESGVDPRTD PRADTGPVLA RTIGTGDAVV IGLGAMLGAG
VFAAFAPAAR AAGAALLFAL ATAAIVAYCN ATSSARLAAL YPQAGGTYVY GRRRLGDFWG
YLAGASFITG KTASCAAMAL TVGAYTWPGH ERLVAGTATA ALTAVNYSGM RRAAWLTRLI
VVVVLTVLVV VVVVCVTSGA AEPVRLSPTG RDGPAGPASP SLWPGLPQAA GLLFFAFAGY
ARIATLGEEV RDPRRTIRRA IPTALGITLV VYAAVAVALL LVLPVAALGA SAAPLTDAVR
AAGMPGLAPV VRVGAAVGAL GSLLALILGV SRTTLAMARD GHLPTPLAAV HPRFGVPHRA
ELTVGAAVTA LVLTTDLRGA IGFSSFGVLL YYAVANAAAW TLSPTEGRPV RAVPVVGLLG
CLLLAFSLPG TSVLGGSAVL AAAAVVYAAR HAGGHPARQ
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