Gene Franean1_4156 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4156 
Symbol 
ID5672511 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4936374 
End bp4936826 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content76% 
IMG OID641243029 
ProductMarR family transcriptional regulator 
Protein accessionYP_001508446 
Protein GI158315938 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.331896 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.584748 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTCGA CGTCACCCGA CGCCGCGCCC GCCCGGTTGC GACACGCCAC CCACTGGCTG 
ATCGCGCAGC TCGCCAAACA CGCGCAGCGG CGCAGCTCCC ACGCCTTCAC CGCGCTCGGC
GCCCACCCCG CCCACTACGC GCTGCTCGCC GCCCTCGACG AGTTCGGCCC GGCCAGCCAG
GCCACCCTCG CCCGCCGCGC CGCCCTCGAC CGCGCCGACA CCGCCGGACT CCTCACCGAC
CTGCGCACCC GCGGCCTGGT CGAACGCACC CCCGACAGCA CCGACCGGCG CCGCACCGTC
ATCACCCTCA CCGACGAGGG CACCACCCAC CTGCACCACC TCGACGCCGT CACCGCCGCG
ATCGGCGACG ATCTGCTCGC CGGCCTGCCC CCCGCCGACC GCCACCAGTT CACCGCCCTG
CTGACCCGCC TACTCACCGA CCGCCCCCAC TGA
 
Protein sequence
MASTSPDAAP ARLRHATHWL IAQLAKHAQR RSSHAFTALG AHPAHYALLA ALDEFGPASQ 
ATLARRAALD RADTAGLLTD LRTRGLVERT PDSTDRRRTV ITLTDEGTTH LHHLDAVTAA
IGDDLLAGLP PADRHQFTAL LTRLLTDRPH