| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4139 |
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| Symbol | |
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| ID | 5672496 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 4920577 |
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| End bp | 4922028 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641243014 |
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| Product | amidase |
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| Protein accession | YP_001508431 |
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| Protein GI | 158315923 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.459959 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGTGGA GTTTTCAGTC AGCCGAAGAG CTCGCGGCCG CGTTGCGTGC CGGTGACGTG
ACCTCGGCGG AGCTGACCGA CGAGGCGATC GCCCGTATCG AGCGGGACGA CAAGGTGATC
AACGCGATCT GCGTGCCGGA CTTCGACCGC GCGCGGGACG CCGCGCGCGG CGCCGACCAG
GCGCGCGCCC GCGGCGAGGA CCGGCCGCTG CTCGGCATTC CGGTGACGGT CAAAGAGTCC
TACAACATCG CCGGGCTGCC CACGACCTGG GGCATGCCGC AGCACGCGAA CTACCTGCCG
GCCGAGGACG CGGTACAGGT GTCGCGACTC AAGGCCGCAG GCGCGGTGGT GCTCGGCAAG
ACCAACGTGC CGTTGGGGCT GCAAGATATC CAGAGCTTCA ACGAGATCTA CGGCACCACC
AACAACCCGT GGGATCACGA TCGCACGCCG GGCGGCTCCT CCGGTGGATC GGCGGCGGCC
CTGGCGTCCG GGTTCGGCGC GCTGTCCATC GCCTCCGACA TCGCCGGTTC GCTGCGCACC
CCCGCGCATT TCTGCGGCGT CTACGCGCAC AAGCCGACAC TCGGGCTGGC GGCGAGCCGC
GGCATGGTCG CGCCTCCCGC GCCGGCATTG CCGACCGACC TCGACCTCGC CGTCGTCGGT
CCGATGGCGC GCACTGCCCG CGACCTCACC CTCCTGCTCG ACGTCATGGC CGGACCGGAC
CCGCTGACGC TCGGCGTGGC GCACAACGTG GCGCTGCCGC CCGCGCGCCA CGAGCGCCTC
GCCGACTTCC GGGTCTTGGT CCTCGACGAG CACCCGCTCA TTCCGACCGG GTCCGCTGTG
CGGGCGGGCG TGCACCAGGT GGCCGACGCG CTTGTCGACG GAGGAGCCCG CGTCGAACGG
CACACTCCGC TGCTGCCCGA TCTGACCGAA GCCGCGACGC TCTACACGCA GTTGCTGTTC
TCGGGCTCCG TCGCGCGTTT TCCCGTCGAG GCGTACGAGC AGCTGCGGAC CCGCGCCGCC
GGGCTGAGCG CGGACGACCG GAGTCTCGAC GCGGCGCGGC TGCGCGCCAT GGTGTTCAGC
CACCGCGACT GGATCGAGGC GAACAACCGT CGCGAGCTCC ACCGCCACGG CTGGCGGCAG
CTGTTCGCCG AGTTCGACGT CGTGGTGTGT CCGATCACGC CGACTCCCGC GTTCGGTCAC
GACCACAACC CCAATCCGCT GGAACGCCGG ATCGACATCG ACGGCGTCGA GTACCCGTAC
TTCGACCAGC TCGTCTTGGC CGGCCTGGCC ACCATGCCGG GCCTGCCGGC CACCGCGATA
CCCGCGGGCC GGTCCCCCGA GGGCCTGCCG GTGGGAGTGC AGCTCATCGG CCCGATGTTC
GAGGACCGCA CCCCGCTGCG GCTGGCCGAA CTGCTCGAGC AGAAGATCGG CGGCTTCCAG
GCACCGACGT AG
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| Protein sequence | MEWSFQSAEE LAAALRAGDV TSAELTDEAI ARIERDDKVI NAICVPDFDR ARDAARGADQ
ARARGEDRPL LGIPVTVKES YNIAGLPTTW GMPQHANYLP AEDAVQVSRL KAAGAVVLGK
TNVPLGLQDI QSFNEIYGTT NNPWDHDRTP GGSSGGSAAA LASGFGALSI ASDIAGSLRT
PAHFCGVYAH KPTLGLAASR GMVAPPAPAL PTDLDLAVVG PMARTARDLT LLLDVMAGPD
PLTLGVAHNV ALPPARHERL ADFRVLVLDE HPLIPTGSAV RAGVHQVADA LVDGGARVER
HTPLLPDLTE AATLYTQLLF SGSVARFPVE AYEQLRTRAA GLSADDRSLD AARLRAMVFS
HRDWIEANNR RELHRHGWRQ LFAEFDVVVC PITPTPAFGH DHNPNPLERR IDIDGVEYPY
FDQLVLAGLA TMPGLPATAI PAGRSPEGLP VGVQLIGPMF EDRTPLRLAE LLEQKIGGFQ
APT
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