| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4110 |
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| Symbol | |
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| ID | 5672468 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 4893568 |
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| End bp | 4894803 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641242986 |
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| Product | diguanylate phosphodiesterase with GAF sensor(s) |
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| Protein accession | YP_001508403 |
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| Protein GI | 158315895 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCGTC CGGCGTCGCC ACTGGGCCCA CCGATCGAGG TCGTGGAACC GGACCCCGCG
GTGGCCGACC TGCTCGGGGT GCTGCGCCGC CACCTCGGTA TGGACCTCGC CTGGCTGGGC
CGGGTCGAGG GCGACCTGCT GGTGCTGCAG GTCGTCAACG GCGACGCGGC CGGTTTCGGC
ATCGCGCCGG GCAGCACGAT CCGCCGCGAG GCGGCCCTGT ACGCCCAGGT ACTCGCCCAC
GATCAGCCGG TCATCATCCC CGACACCCAC CGCGACCCGC GGACCGCCGA CGCGGGCACC
GTCCAGGTAC TGGGTATCGG GGCGTACGTG GCCACGCCGG TCTACGACAA CGACAACGAC
ATCTACGGCA TCCTCGGCTG CCTCGCGCAC CAGCCCCGCC CGGAGCTGCG CGAACGCGAC
GGCCGGTTCC TCAGCCTGCT GGCCGCGTTC CTCAGCGACG CCGTCATCGA CCTGCACCGG
GTGTGGGAGA CGCGCAGCCG GGTCTCCCGG GTGATCAACG ACCTCATCGA CGCCGGTGGC
CCGCAGATCG TCTTCCAGCC GGTGGTCGAC CTCTCCGATG GCGGCGTGGT GGGAGTCGAG
GCGCTGTCAC GCTTCCCGGG ATCGACCGAC GACCCGGAGG GCTGGTACGC CGTCGCCAGC
AGCGTCGGGC TCGGCACGGA CCTCGAGCTG ACGGCCATCC GGCGCGCGCT GACCGTGATG
TCCGAGCTGC CCAACTCGGT CACCCTCGCC GTGAACGCCT CACCGGCCAC CATCACCTCC
GGCCTGGTCG GCCTGCTGGC CCCGTTCCCG GCCTGCGAAC GACTGATCGT CGAGATCACC
GAGCACGAGT ACTTCAGCGC CGACCCGGTG GTCATGCGCG GCATCCACGC GCTGCGCGCG
CTCGGCGCCC AGATCGCGGT GGACGACATC GGCACCGGCT ACGCCGGCCT CGAACAGCTC
ATCCACCTGC GGCCCGAGAT CGTGAAACTC GACTACCTGA TCACCCACGG GATGGACGGC
GACCCCGCCC GCCGCGCCGT CGCCGCCGCC ATCGTGGACG TCGCCGCGGA GATCGGCGGC
TGCGTGATCG CCGAGGGCAT CGAGAACACC GCCGAGCTGC GGGTCGCCAT CGACGCCGGC
ATCGACTTCG GCCAGGGCTA TCTGCTCGGC GCACCCGCCC GCACCGCACG CGCCGCCTGC
ACCCCGGCCG TCGCACTCGC CAACCGCCCC GGCTGA
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| Protein sequence | MARPASPLGP PIEVVEPDPA VADLLGVLRR HLGMDLAWLG RVEGDLLVLQ VVNGDAAGFG
IAPGSTIRRE AALYAQVLAH DQPVIIPDTH RDPRTADAGT VQVLGIGAYV ATPVYDNDND
IYGILGCLAH QPRPELRERD GRFLSLLAAF LSDAVIDLHR VWETRSRVSR VINDLIDAGG
PQIVFQPVVD LSDGGVVGVE ALSRFPGSTD DPEGWYAVAS SVGLGTDLEL TAIRRALTVM
SELPNSVTLA VNASPATITS GLVGLLAPFP ACERLIVEIT EHEYFSADPV VMRGIHALRA
LGAQIAVDDI GTGYAGLEQL IHLRPEIVKL DYLITHGMDG DPARRAVAAA IVDVAAEIGG
CVIAEGIENT AELRVAIDAG IDFGQGYLLG APARTARAAC TPAVALANRP G
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