| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4052 |
|---|
| Symbol | |
|---|
| ID | 5672410 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 4831975 |
|---|
| End bp | 4832457 |
|---|
| Gene Length | 483 bp |
|---|
| Protein Length | 160 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641242928 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_001508345 |
|---|
| Protein GI | 158315837 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.587614 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.259475 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGGCATCG AGCAGATCGG CGCCGCCGTC GGCATCCGCG GCCCGGGAAT CTACCGGCAC
TTCCCCAGCA AGGACGCGGT GCTCGTCGAG CTGCTCGTCG GCATCAGCCA GCACCTGCTC
GATGCGGCCC GCGAGGCCCG CCGGGTCGGC GCCTCCGCCC TGGAGACCCT CGACCTGCTC
GTCCGCGGGC ACGTCGAGTT CGCGCTCGAC AACCCAGACC TGATCGTCAT CCACGACCGC
GACCTGTGGA GCCTGCCGGA GCCGGCCGAG CGCGAGGTCC GCAGGCTGCA GCGGGCCTAT
GTCGAGCAGT GGGTGGACGT CCTGCGGCAG GTGCGGCCCG AGCTCGACGC GCCGACCGCG
CGGGCGCGTA CCCATGCGCT GTTCGGTCTG ATCAACTCCA CCCCACACAG CGCGACCGAT
CTACAGCGGG CCGAGATGGC CGTGATGCTG CACACGATGG CGCTGGGCGC CGCCCGCGGC
TGA
|
|---|
| Protein sequence | MGIEQIGAAV GIRGPGIYRH FPSKDAVLVE LLVGISQHLL DAAREARRVG ASALETLDLL
VRGHVEFALD NPDLIVIHDR DLWSLPEPAE REVRRLQRAY VEQWVDVLRQ VRPELDAPTA
RARTHALFGL INSTPHSATD LQRAEMAVML HTMALGAARG
|
|---|
| |