Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_3997 |
Symbol | |
ID | 5672357 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 4780375 |
End bp | 4781085 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641242875 |
Product | hypothetical protein |
Protein accession | YP_001508292 |
Protein GI | 158315784 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.630456 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.649548 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCGCGAAC TGCTCGACGG CCCGCACGCC CGCTGCCCGC TGCCCGCTGA AGCGTTACAA CGCCGGCCGT CCCGTCAAGG ACAGCTCCGG CCGCTGCGAT CGCGACGAAC ACCTCGCCGA GCCGGAGCGC TTGCACTGCT GATGGCAGCA GTCCGGGCCA AAGCCGGAGG TCATGCGCTG CGTGGCAGTG GAGCGGATCG CGATGCGGCC TCGGTGAGGC GGCGCTGCGC TCCGCCGGGT CCTGAAGACC CTCGGGTTGC CACCGGCTCC GAAACGGCAG ACCGACACGA CGTGGCGGCA GTTCCTGCTC ACCCAGGCCT CGACCATGCT GGCCGTCGAC TTCTTCCATG TGGACTGCGC CGTGACGCTG CGGCGGTTGT ACTGCTTCTT CGTCCTGGAG GTCGGCTCCC GCACCGTCCA CATCCTCGGG GTCACCGCCC ACCCCGGACT CCGCGAGCGA ACGCCTACGC GGAACGGTTC GCCCTAACCG TCCGGACCGA GGTCACCGAC CGAATGCTGA TCTTCGGTGA ACGGCACCTG CACGCTGTCC TGGCCGAGTA CGCACGGCAC TACAACGGAC GACGGCCCCA CCGCGGCCGC GACCTTCAAC CACCACGGCC CGACCACCCC GTCGCCGACC TGACCCAGGA ACGGATCAAG CGCCAGCCCG TCCTCGGCGG CCTGATCAAC GAATACGAAC GAGCCGCCTA A
|
Protein sequence | MRELLDGPHA RCPLPAEALQ RRPSRQGQLR PLRSRRTPRR AGALALLMAA VRAKAGGHAL RGSGADRDAA SVRRRCAPPG PEDPRVATGS ETADRHDVAA VPAHPGLDHA GRRLLPCGLR RDAAAVVLLL RPGGRLPHRP HPRGHRPPRT PRANAYAERF ALTVRTEVTD RMLIFGERHL HAVLAEYARH YNGRRPHRGR DLQPPRPDHP VADLTQERIK RQPVLGGLIN EYERAA
|
| |