Gene Franean1_3997 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3997 
Symbol 
ID5672357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4780375 
End bp4781085 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content69% 
IMG OID641242875 
Producthypothetical protein 
Protein accessionYP_001508292 
Protein GI158315784 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.630456 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.649548 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCGAAC TGCTCGACGG CCCGCACGCC CGCTGCCCGC TGCCCGCTGA AGCGTTACAA 
CGCCGGCCGT CCCGTCAAGG ACAGCTCCGG CCGCTGCGAT CGCGACGAAC ACCTCGCCGA
GCCGGAGCGC TTGCACTGCT GATGGCAGCA GTCCGGGCCA AAGCCGGAGG TCATGCGCTG
CGTGGCAGTG GAGCGGATCG CGATGCGGCC TCGGTGAGGC GGCGCTGCGC TCCGCCGGGT
CCTGAAGACC CTCGGGTTGC CACCGGCTCC GAAACGGCAG ACCGACACGA CGTGGCGGCA
GTTCCTGCTC ACCCAGGCCT CGACCATGCT GGCCGTCGAC TTCTTCCATG TGGACTGCGC
CGTGACGCTG CGGCGGTTGT ACTGCTTCTT CGTCCTGGAG GTCGGCTCCC GCACCGTCCA
CATCCTCGGG GTCACCGCCC ACCCCGGACT CCGCGAGCGA ACGCCTACGC GGAACGGTTC
GCCCTAACCG TCCGGACCGA GGTCACCGAC CGAATGCTGA TCTTCGGTGA ACGGCACCTG
CACGCTGTCC TGGCCGAGTA CGCACGGCAC TACAACGGAC GACGGCCCCA CCGCGGCCGC
GACCTTCAAC CACCACGGCC CGACCACCCC GTCGCCGACC TGACCCAGGA ACGGATCAAG
CGCCAGCCCG TCCTCGGCGG CCTGATCAAC GAATACGAAC GAGCCGCCTA A
 
Protein sequence
MRELLDGPHA RCPLPAEALQ RRPSRQGQLR PLRSRRTPRR AGALALLMAA VRAKAGGHAL 
RGSGADRDAA SVRRRCAPPG PEDPRVATGS ETADRHDVAA VPAHPGLDHA GRRLLPCGLR
RDAAAVVLLL RPGGRLPHRP HPRGHRPPRT PRANAYAERF ALTVRTEVTD RMLIFGERHL
HAVLAEYARH YNGRRPHRGR DLQPPRPDHP VADLTQERIK RQPVLGGLIN EYERAA