| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3961 |
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| Symbol | |
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| ID | 5672322 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 4743178 |
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| End bp | 4743909 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641242840 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001508257 |
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| Protein GI | 158315749 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.389066 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.14161 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGACG GACCGTCCGG TCCGTCAGGC TCCGTGGATC AGGCAGGGAC GGTGGATCAG
GCGGGTGCCG TGGAGGAGCC GGTGCTGGCT GTCTGGTGCG ACTACGGCGG CGTGCTCAGC
TCCTCCATCG CCGGCTCACC CGCCCAGGTG GCGACCGCGG CGGGAGTGCC GACGTCCGAG
CTCATGGCCG CGATCCGGCG GGTCGCGACG TCCTTCGGGG CGACGATGAT CGAACCGCTG
GAACTCGGGG TCCTCTCCCA GCACGAGTGG GGCCTGCGGG TCACCGCGGA GCTGGCGCCG
GCCTGGACGC CGCGGATCGA CCTGACCCGC TTCGGCGACC ACTGGTACGC GGGCCGGACG
GTCAACACGA CCCTGTTCGA GCTGCTCGAC CGGGTGCGGG CGAGCGGCGT GCGGGTCGGC
ATGCTCACCA ACAGCGTGCG GGAGTGGGAA CCGCACCGGC GAGCGCTGGC GCCGGCCGTC
GACCCGTTCG AGGTCACCGT CAACTCCTTC GAGGTGGGCC TGCGCAAGCC GGATCCGGCG
ATCTTCGAGC TCGCCGAGTC GCGGTTCGGG ACGCCGCCGC GGGCCTGCCT GCTCATCGAC
GACCTGGCGG TCAACTGCGC CGCGGCCCGG GCCCGGGGCT GGCGGGCGAT CGAGCACACC
GAGCTCGAGG ACACTCTGGC ACAGCTGCGC GCCGCTATTC CTGCCGTGGC CGCGGACGCG
GTGACGGACT AA
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| Protein sequence | MPDGPSGPSG SVDQAGTVDQ AGAVEEPVLA VWCDYGGVLS SSIAGSPAQV ATAAGVPTSE
LMAAIRRVAT SFGATMIEPL ELGVLSQHEW GLRVTAELAP AWTPRIDLTR FGDHWYAGRT
VNTTLFELLD RVRASGVRVG MLTNSVREWE PHRRALAPAV DPFEVTVNSF EVGLRKPDPA
IFELAESRFG TPPRACLLID DLAVNCAAAR ARGWRAIEHT ELEDTLAQLR AAIPAVAADA
VTD
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