| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3952 |
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| Symbol | |
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| ID | 5672313 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 4725004 |
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| End bp | 4726656 |
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| Gene Length | 1653 bp |
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| Protein Length | 550 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 641242831 |
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| Product | PfaD family protein |
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| Protein accession | YP_001508248 |
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| Protein GI | 158315740 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
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| TIGRFAM ID | [TIGR02814] PfaD family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0190583 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0375057 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTGACCC CGGTCGCGCC CGCCCCCCGC CCCGCGGCGG CTCAGCCGGC CACGGCCCAC
CCCGGCGCGG CCGGGGCACT CGCCCGGCGG CCGGCCGACA TCCACCGGGT GCTCGCCGAT
CTGGAGCGGC CCTGCTACGT CGTGCAGGAC GCGGCGGGGC TCGGCGTCAC CGGCGACGAG
CGGGTCGCCG CGGCGGCCGG GCGGGTCCTG GCCGCGGTCG GCCCGCTGCC GCCGGAGCGC
CTCGGCGCCC CGGCGTTCCG CCGCGACCAC CAGGTCGCCC AGGCGTACAT GGCCGGGTCG
ATGGCTAACG GCATCGCGTC GGCCGACCTG GTCGTCGCGC TGGCCCGGGC GGGCTTCCTG
GCCTCGTTCG GCGCGGCCGG CGTCGTCGCC GCCCGGGTCG ACGACGCGCT GGCCGACATC
CGCCGGCGGG CACCGGGCCT GGCGTTCGGC TGCAACCTGA TCCACAGCCC GACCGAGGCG
GCGATGGAGC GCGACGTCGT CGACGCCTGC CTGCGCCACC AGGTGCGCTG CGTCGAGGCG
TCGGCGTTCC TGGACCTCAC CCCGCAGGTG GTGCGCTACC GGGTCGCCGG GCTGCGCCGC
GGCCCCGACG GCCGGGCCGT CGCCGACAAC CGCGTCGTCG CCAAGGTGTC GCGCACCGAG
GTCGCCGAGC TGTTCCTGCG GCCCGCGCCG GCCGCGCTGG TCCGTCCGCT GGTGGAGCAG
GGGCTGGTCA GCGCCGAGCA GGCGGAGCTG GCGGCGACGG TGGCGATGGC CGACGACGTC
ACCGCCGAGG CCGACTCCGG CGGGCACACC GACCGCCGGC CGCTGCCCGT CCTGCTGCCC
GAGCTGCTCG CGCTGCGCGA CAGCCTGCGC GGCGAGTCCG GAGGGCGCAC CGTGCGGATC
GGGGCGGCCG GCGGGCTCGG CACCCCGCGC GCCGTCGCCG CCGCGTTCAC GCTCGGCGCG
GACTACGTGG TGACCGGCTC GGTCAACCAG GCCTCCGTCG AGGCGGCGCA GTCGCCGGCC
ACCAAGACGC TGCTGGCCCA GGCGGGCGTC ACCGACTGCG TCCAGGCGCC GTCGGCGGAC
ATGTTCGAGA TCGGCGCGGA CGTCCAGGTG CTCGGCCGGG GCACCATGTT CGCGTCGAAG
GCGCGCCGGC TCTACGAGCT GTACCGCCGC TTCGACGGGC TCGACGAGAT CCCGGCCGAC
GAACGCGCGG GCCTGGAGCA GCGGATCTTC CGCCGCTCGC TGGACGAGGT CTGGGCCGAC
ACCGTCTCCT ACTTCAGCAC CCGCGACCCC GAGCAGATCG AACGCGCCCA GGAGAACCCG
AAGCGGCGGA TGGCGCTGGT CTTCCGCTGG TATCTCGGGC TGTCGTCGGG CTGGAGCATC
GCCGGTGCCC CGGACCGGGT CGCCGACTAC CAGGTCTGGT GCGGCCCGGC GATGGGCGCC
TTCAACACCT GGGTGCGCGC CAGCGCGCTC GAGCCGCTGG CGAACCGGCA CGCCGCCGTG
ATCGCCGCCG AGCTGATGCG CGGCGCCGCG TTCACCAGCC GGGCCGCCGC GCTGGCCCAG
GCCGGCGTCC GGCTGCCGGC GCTCGCCACG ACCTACGTGC CGCGGCCGCA CCTGCCGCGG
CCAGATTCCG ATCCGGGAGA GCAGGCACCA TGA
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| Protein sequence | MVTPVAPAPR PAAAQPATAH PGAAGALARR PADIHRVLAD LERPCYVVQD AAGLGVTGDE
RVAAAAGRVL AAVGPLPPER LGAPAFRRDH QVAQAYMAGS MANGIASADL VVALARAGFL
ASFGAAGVVA ARVDDALADI RRRAPGLAFG CNLIHSPTEA AMERDVVDAC LRHQVRCVEA
SAFLDLTPQV VRYRVAGLRR GPDGRAVADN RVVAKVSRTE VAELFLRPAP AALVRPLVEQ
GLVSAEQAEL AATVAMADDV TAEADSGGHT DRRPLPVLLP ELLALRDSLR GESGGRTVRI
GAAGGLGTPR AVAAAFTLGA DYVVTGSVNQ ASVEAAQSPA TKTLLAQAGV TDCVQAPSAD
MFEIGADVQV LGRGTMFASK ARRLYELYRR FDGLDEIPAD ERAGLEQRIF RRSLDEVWAD
TVSYFSTRDP EQIERAQENP KRRMALVFRW YLGLSSGWSI AGAPDRVADY QVWCGPAMGA
FNTWVRASAL EPLANRHAAV IAAELMRGAA FTSRAAALAQ AGVRLPALAT TYVPRPHLPR
PDSDPGEQAP
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