Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_3925 |
Symbol | |
ID | 5672286 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 4694231 |
End bp | 4694872 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 641242804 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001508221 |
Protein GI | 158315713 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.376299 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.034998 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCACCAG CGGCCGAGCC GGCGGTGCGA CCCGAGGGCG AGCAGTCGGA GCCGGGCCGC CGTTCCTACG ACAGCCCCGT GCGCCGTCAG CAGGCCGAGC GGACCCGGGA ACGCATCGTC GCGGCCGGAG CCGAGATGGT CCACGGGTTC CCGAGCTGGG ACTGGCGTGA GTTGACCGTG CGGGCCGTCG CCCGGCGTGC CCAGGTCAAC GAGAGCACGA TCTACCGCTA CTTCGGCAGC GAGCGGGGGC TGCGTGACGC GGTGATGCGC CACCTCGAGC AGGAGGCCGG CGTGGACGTG GACACCCTCC GCCTGGACGC CTTCGGCGAC GTCATCGGCC GGGTCTACTC CTATCTCTCG TCGTTCCCCA CGAGCGGCGG GCCGAGCGGC GACCCGACGT TCGCGGCGCT CGACCGGCGC CGCCGCGACG CGCTCGTCGC CGCCGTGGCC GCCGCCGCGG ACGACTGGTC GCCGGCCGAG TGCGCGCTCG TCGCCGCCGC TCTCGACGTC TTCTGGAGCG TGCCGTCGTT CGAGCGCCTG ATCACCGTGT GGGAGCTGGA CGCCAGCCAG GCGAGCCGCG TCGCCGGCTG GGTGATCGAG CTGATCCGCG GCGCCGTCCG GGACGGCCAC GGACCGCGCT GA
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Protein sequence | MPPAAEPAVR PEGEQSEPGR RSYDSPVRRQ QAERTRERIV AAGAEMVHGF PSWDWRELTV RAVARRAQVN ESTIYRYFGS ERGLRDAVMR HLEQEAGVDV DTLRLDAFGD VIGRVYSYLS SFPTSGGPSG DPTFAALDRR RRDALVAAVA AAADDWSPAE CALVAAALDV FWSVPSFERL ITVWELDASQ ASRVAGWVIE LIRGAVRDGH GPR
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