| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3848 |
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| Symbol | |
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| ID | 5672211 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 4570873 |
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| End bp | 4571874 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 641242726 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001508146 |
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| Protein GI | 158315638 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0846255 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.776114 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGTCC TGGCCGGAAT GCTGGACGGG CCGCGGGCGC GGGGGGCGTT CACGATCCGC
TCGGTCATGT CCCCGCCCTG GTCGATGCTC ATCAGGGACC AGGCGCCGCT GACCGTCGTC
GCGGTCGTGC ACGGCGAGGC CTGGGTGCTC CCCCGGGACA CCCCCGCGGT GCAGCTGCGC
GCGGGCGACG TGGCCGTCGC CCGCGGGCCC GACCCGTACG TCGTCGCCGA CGACCCGGCT
ACCCCGCCGC GGATCGTGAT CCATCCCGGG CAGGTCTGCA CCACGCTGTC GGGTGCGAGC
CTCGCCGCGC AGATGGATCT CGGCGTGCGC ACCTGGGGCA ACCAGCGCGA CGGCGCGACG
GCCCCGCCGA CGACGATGCT CACCGGCACG TACCAGCAGC ACAGCGAGGT CAGCCGCCGG
CTGCTCGACG CGCTGCCCGC GCTGGCCGTC ATCCGCGCGG ACGACTGGGA CTGCCCGCTG
GTACCCATGC TGGCCCAGGA GATCGGCCGG GACGACCCGG GCCAGGCCGC CGTCCTCGAC
CGCCTCCTGG ACCTGCTGCT CGTCACCGCG GTGCGGGCCT GGTTCGCCCG CCCCGACACC
GACGCGCCGC CGTGGTGGCG GGCCAACGGC GACCCCGTCG TCGGCCACGC GCTGCGGCTG
CTGCACAACC ACCCCGAGCG CCCCTGGACG ATCGCCGCCC TCGCCGCGGC CACGGGCGTC
TCCCGCGCCT CGTTCGCGCG CCGGTTCGCC AGCCTGGTCG GCGAGCCGCC CATCGCGTTC
CTGACCGGCT GGCGTCTCAC CCTGGCCGCC GACCTGCTCC AGGAGCCGGC GGCCACGGTC
GGCGCGGTGG CCCGCCAGGT CGGCTACGGC AGCCCGTTCG CCCTCAGCAC GGCGTTCCGC
CGCCGGTACG GCGTCAGTCC GCAGCAGTAC CGCGCCCGCG CCCACGGCGA CCGGGCGGAC
CAGCCGCCGT CCGACGGCCG CCCGGCGGAC GCGCCCGGAT GA
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| Protein sequence | MDVLAGMLDG PRARGAFTIR SVMSPPWSML IRDQAPLTVV AVVHGEAWVL PRDTPAVQLR
AGDVAVARGP DPYVVADDPA TPPRIVIHPG QVCTTLSGAS LAAQMDLGVR TWGNQRDGAT
APPTTMLTGT YQQHSEVSRR LLDALPALAV IRADDWDCPL VPMLAQEIGR DDPGQAAVLD
RLLDLLLVTA VRAWFARPDT DAPPWWRANG DPVVGHALRL LHNHPERPWT IAALAAATGV
SRASFARRFA SLVGEPPIAF LTGWRLTLAA DLLQEPAATV GAVARQVGYG SPFALSTAFR
RRYGVSPQQY RARAHGDRAD QPPSDGRPAD APG
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