| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3763 |
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| Symbol | |
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| ID | 5672128 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 4459408 |
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| End bp | 4462362 |
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| Gene Length | 2955 bp |
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| Protein Length | 984 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641242644 |
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| Product | ABC transporter related |
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| Protein accession | YP_001508064 |
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| Protein GI | 158315556 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.849502 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGAGG GCTCCCTCGC GCACCCGCGG CCGGCCCTGA TCGCCACCCT CGCCGGCATC
GTCAACGGGA CCACCATGAT CCTCGGGGCC GCCGCCATCG GCTGGGCCAC CGACCATCTG
ATCGTCCCGG CCCTCGCCGG CGGCCACGTC GCCCGCGCCA CCTGGTGGAT CGCGGTCGGC
GCGATCCTCG GCGTCTCCAC GGTGCGCTGG ATGACCATCG TCATCCGCGG CATCGCGACC
GGGTACGTGC AGCACGGCTC GCAGGCGCGG GTCCGGCGGT CCGTCGTCGG CCGGTATCTC
GAGCTCGACC TGGCCTGGCA CCGTCGGCAC CCGCCCGGTC GCCTGCTGTC CACCGCGGTG
TCCGACGTGG ACGCGCTGTG GTTCCCGATG GTCTTCTACT ACTTCGCGCT CGGGATGATC
GTCATGCTGG TCGTCGCGAT CGTCCAGCTC TTCGGGCACG ACACCGCCCT CGGGCTGGTC
GGGGTCGGCC TCGTCGGCTC CGTCCTCGGG GTGAACCTGC TCTACCAGCG CCTGCTCAGC
CCGCGCGCCC GGGCGGTGCA GGACAGCCGC GGCGAGTTCG GCGCGCTCGC CCTGGAGAGC
ATCGAGGGCG GCCAGGTCGT CCGGACCCTC GGCATCGCCG ACCGCGAGCG GGCCCGGGTC
GGTGCCGCGG CGCTCCGGCT GCGCGCGGCC ACCACCGCGG CCGGCGACCT CAGCTCGGTG
TTCGACCCGC TCCTGGAGGT GCTGCCGACC GCCGCGGTCA TGGCCGTCCT CGCCGTCGGC
TCGCGCCGGG TCGAGACCGG CGACCTCAGC GTCGGCGTCC TCGTCGAGGT CGTCTACCTG
CTGCTGACCA TCTCCATCCC ACTCAACGTG ATCAGCCGTT TCCTGGGGAT GCTGCCGGTC
TCGGCGGCCG GCCGCACCCG CGTCGCCGCC GTGCTCGACG CCGCCGAGAC CACCGCCCAC
GGAGACCGCG CCCTGCCCAG CGGCGCCGCT CCCGGCCCGC GGGCGCCGGC TCCGCGGGCG
CCGGGCGTCG GGCTCGTCCG CGGCGGGACG AGCCTTCTCA CGGACGTCGA CATCGAGGTG
CGCCCCGGCG AGATCGTCGC CATCGTCGGG CCGACCGGCT CGGGCAAGAC CACCCTGATC
GAGCTCCTCA GCCGCCAGGT CGACCCCACC GACGGCGTCG TCGAGATCGG CGGGGTTCGC
GCCACGGACC TCGCCCGCGG GGAGATCTCG TCCCAGCTGG CCGTTGTCGG GCAGACCTCG
TGGCTGTTCG GCGGCAGCGT CCACGCCAAC CTTCAGCTCG ACGGCCATCC CCGCGAACGG
CGTCCCTACA CCGCCGGTGA GATCTGGCGG GCGCTGGCCG CCGCCGGCGC CGATGACGTC
GTCCGTGACC TGCCCAACGG CCTCGACACC CGGGTCGGCG AGCGCGGCGC CCGGCTCTCC
GGCGGCCAGC GGCAGCGGCT GTGCCTGGCC CGCGCGCTGT TGCGCGAGCC CGGCGTGCTG
CTGCTGGACG ACGCCACCTC GGCCCTCGAT CGGCGCACGG AGGCCGCGCT CGCCGAGCTG
CGCGCGGCCG GCGTCGCGCG CATCCACGAG ATGGCCGCGG AGACGTTCGC GCGCACCGGC
AGCGCCGACC TCGTCAGCCG GCTCACCGGC GACGTCGACG CCGTCACGAC CTTCGTGCAG
AGCGGCGGCG TCATGCTGCT CGTCAACGTC ACCCAGATGA TCATCGCCGG CGTGCTGATC
GCGGTGTACT CCTGGCAGCT GGCGGTGCCC GTGCTGGCGA CGGCGGTGCT GTTGTTCGTC
GCGATGCGTC GCGTGCAGGC GCTGGTGGCG CGCCGGTTCA CCGTGGTCCG GGAGAGCGTG
TCAGCGCTGC AGTCCACCGT GGGTGAGGCC GTCACCGGCA TCAGCGTCAT CCGCTCGACC
GGCACCGAGG CACGCAGCCG CGCCATGGTC GAGGACGCCG TCGAGCACAC GGCGTCGGCG
CAGCGCCGCA CCCTCGTCCC GCTGCACTTC AACACCGCCT TCGGTGAGAT CGCGATCTCG
TTCGTCACCG TGGTGGTGAT CGTCGCGGGC GTCCGCTGGT CGACCGCCCA CACCCGGTGG
GAGCCGACGC TGCACCTGTC GGCCGGTGAG CTGGTGGCGA TGCTCCTGCT CGTCACCTTC
TTCGTCCGGC CGTTGCAGAT GCTGGTCCAG ATGCTCGGCG AGGCCCAGAA CGCCGTCGTC
GGCTGGCGCC GCGCGCTGGA GATCCTCATC GCCGCGGGCG AGCACGTCGC CGTCGTCGGC
GAGACCGGCT CGGGCAAGAG CACCTTCGCC CGGCTGCTGA CCAGGCAGAT CGCGCCACGC
CACGGCCGTG TCCTGCTCGG CGGCCTCCCG GCCGGCCAGG TGTCGGACCT GTCCTTCCAG
CGCCGCGTCG CGGTCGTCCC GCAGGACCCG TTCCTGTTCG ACGCCACGAT CGCCGACAAC
ATCCTCGCCG GGGTCCGCGG CGACGCCGGG GCGCTCGACG AGATCGTCGA CTCGCTCGGC
CTGCGGCCGT GGATCGCCAC CCTGCCCGAG GGCCTCGACA CCCGCGTCGG CACACGCGGC
GACCGGCTCT CCGCCGGCGA GCGCCAGCTC GTCGCCCTCG CCCGCACCGC CCTGGTCGAC
CCCGACCTGC TCGTGCTCGA CGAGGCGACC AGCGGCGTCG ACCCCGCGAC CGACGTCCGC
GTGCAGCACG CGCTCGGCGC GCTCACGGTC GGGCGGACCA CGGTCTCGAT CGCCCACCGC
ATGGTGACGG CCGAGCGCGC CGACCGCGTT CTCGTCTTCG ACCACGGGCG CCTCGTCCAG
AGCGGGCGTC ACGACGACCT CGTCCGCGTC CCCGGCCACT ACGCCCGGCT GCACGCCGCC
TGGGTCGAGA ACACCGCCGG CGCCGACGAG CGCCACCAGA CCCTCCTCCA CCACAATGAC
GGGAGCACCC CGTGA
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| Protein sequence | MLEGSLAHPR PALIATLAGI VNGTTMILGA AAIGWATDHL IVPALAGGHV ARATWWIAVG
AILGVSTVRW MTIVIRGIAT GYVQHGSQAR VRRSVVGRYL ELDLAWHRRH PPGRLLSTAV
SDVDALWFPM VFYYFALGMI VMLVVAIVQL FGHDTALGLV GVGLVGSVLG VNLLYQRLLS
PRARAVQDSR GEFGALALES IEGGQVVRTL GIADRERARV GAAALRLRAA TTAAGDLSSV
FDPLLEVLPT AAVMAVLAVG SRRVETGDLS VGVLVEVVYL LLTISIPLNV ISRFLGMLPV
SAAGRTRVAA VLDAAETTAH GDRALPSGAA PGPRAPAPRA PGVGLVRGGT SLLTDVDIEV
RPGEIVAIVG PTGSGKTTLI ELLSRQVDPT DGVVEIGGVR ATDLARGEIS SQLAVVGQTS
WLFGGSVHAN LQLDGHPRER RPYTAGEIWR ALAAAGADDV VRDLPNGLDT RVGERGARLS
GGQRQRLCLA RALLREPGVL LLDDATSALD RRTEAALAEL RAAGVARIHE MAAETFARTG
SADLVSRLTG DVDAVTTFVQ SGGVMLLVNV TQMIIAGVLI AVYSWQLAVP VLATAVLLFV
AMRRVQALVA RRFTVVRESV SALQSTVGEA VTGISVIRST GTEARSRAMV EDAVEHTASA
QRRTLVPLHF NTAFGEIAIS FVTVVVIVAG VRWSTAHTRW EPTLHLSAGE LVAMLLLVTF
FVRPLQMLVQ MLGEAQNAVV GWRRALEILI AAGEHVAVVG ETGSGKSTFA RLLTRQIAPR
HGRVLLGGLP AGQVSDLSFQ RRVAVVPQDP FLFDATIADN ILAGVRGDAG ALDEIVDSLG
LRPWIATLPE GLDTRVGTRG DRLSAGERQL VALARTALVD PDLLVLDEAT SGVDPATDVR
VQHALGALTV GRTTVSIAHR MVTAERADRV LVFDHGRLVQ SGRHDDLVRV PGHYARLHAA
WVENTAGADE RHQTLLHHND GSTP
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