| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3660 |
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| Symbol | |
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| ID | 5672026 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 4336580 |
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| End bp | 4338256 |
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| Gene Length | 1677 bp |
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| Protein Length | 558 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641242543 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_001507963 |
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| Protein GI | 158315455 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCGATC AAGCGCACGA AGCGGGGGCG GAGCCCGTCG AAGCCCTCGC GCCGGTCGAC
GCCGCCGAGC CCGACGCCGC CGAGCCCGCT GCCACCGAGC CCGCTGCCAC CGAGATCGCT
GCCACCGAGA TCAATGCCAC TGAGGTCGAT CCGGCGTTGC GCCGCCTCGC GCTCACGGTC
ACCCTCGGCG CGATCATGGC CATCCTCGAC ACGACGATCG TGGCCGTAGC CATCAACACC
CTCGGGCGGG ACTTCGACGC CTCGCTGTCG ACGATCTCCT GGGTGTCCAC CGGCTACCTG
CTGGCACTCG CCGTCGTCAT CCCGCTGACC GGCTGGTCGG TCGAGCGGTT CGGCGCGACC
CGGATGTGGA ACATCTCGCT GGTGCTGTTC CTGGCCGGCA GCGCGCTGTG CGGCGCCGCC
TGGTCGGCCG GCAGTCTGAT CGTCTTCCGG GTGCTCCAGG GCCTCGGCGG CGGAATGATC
ATGCCGATCT GCATGACCCT GCTGGCCAGC GCCGCCGGCC CGCAGCGAAT CGGCCGCGTC
ATGAACATCG TCGGTGTGCC TGCGCTGGTC GCCCCGATCC TGGGCCCGGT CATCGGCGGT
CTGCTCGTCG ACAACCTCGA CTGGCGCTGG ATCTTCTTCG TCAACCTGCC GATCGGCGCG
GTAGCACTGG TCGCGTCATG GCGGGTGCTG CCGCGCGACG ACCGCGGGCA GTCGCACCAC
CGGCTCGACG TCCCCGGTCT GCTGCTGATC TCGCCCGGCC TCGCGGCGCT CGTCTACGGC
CTGTCCGAAG CCGGTTCGGG GGACGGCTTC GGAGCACTGA GGGTCCAGAT CAGCACCGCC
GCCGGAGTGG TCGCGCTGGT GGCCTTCGTC GTGCACGCCC TGCGTCGCGA GGGCGCGCTG
CTCGATCTCC GTCTGTTCGG CGACCGCACC TTCACCGTCG CCGGGGTCAC CACGTTCATG
GTCGGCGCCG GCCTGTTCGG CGGGATGTTC CTGCTGCCGC TGTACTTCCA GGTCGCCCGC
GGGCAGAGCG CGCTTGCCGC CGGCCTGTCG CTCGTCCCGC AGGGGGTGGG CGCGATGATA
GGCATGCCGA TCGCCGGGCG GATCGCCGAC CGCCGCGGAG CCGGCTACGT CGTACCGGTC
GGGATGGCCG TCTGCCTGCT CGGCACGGTC GCCTTCACGC AGGTCGACGC GCACACCAAC
ACGGTCGCGC TCGGGGCGCT GCTGTTCGTG CGCGGCCTGG GCTTCGGCGC CTCGATGATG
CCGGCGATGA GCGCCGCCTA CGTGACGCTC CGGCCCGCCG CTGTGCCGCG GGCCACCACG
ACGCTCAACA TCCTGCAGCG GGTCGGTGGC TCCATAGCCA CCGCCCTGCT CGCGGTGGAG
CTACAGCACG GGATCACCAG CCGGCTCCCC GGCTCGGGCG GCGGCATGCT GAACGCATCC
GAAGGAACGG ACCTGCCCGC GACGGTCGCG GACAAGATCG CTCATGCCTT CGGCGCCACG
TTCTGGTGGG TCGTCGGCCT GACCGTGCTC GGTCTCGTGT CCAGCATTTT CCTGCCCCGC
CATGCCCCGA AGCCCACCGC CGCCCCCGAC GGGCATGCCG GGGATGGGGA GGACGAGCCG
GCCGCGGAGG GAGAGCACGT CCCGGTCGGC ACTCCGGCAC CTGATCCAGC CGTGTGA
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| Protein sequence | MSDQAHEAGA EPVEALAPVD AAEPDAAEPA ATEPAATEIA ATEINATEVD PALRRLALTV
TLGAIMAILD TTIVAVAINT LGRDFDASLS TISWVSTGYL LALAVVIPLT GWSVERFGAT
RMWNISLVLF LAGSALCGAA WSAGSLIVFR VLQGLGGGMI MPICMTLLAS AAGPQRIGRV
MNIVGVPALV APILGPVIGG LLVDNLDWRW IFFVNLPIGA VALVASWRVL PRDDRGQSHH
RLDVPGLLLI SPGLAALVYG LSEAGSGDGF GALRVQISTA AGVVALVAFV VHALRREGAL
LDLRLFGDRT FTVAGVTTFM VGAGLFGGMF LLPLYFQVAR GQSALAAGLS LVPQGVGAMI
GMPIAGRIAD RRGAGYVVPV GMAVCLLGTV AFTQVDAHTN TVALGALLFV RGLGFGASMM
PAMSAAYVTL RPAAVPRATT TLNILQRVGG SIATALLAVE LQHGITSRLP GSGGGMLNAS
EGTDLPATVA DKIAHAFGAT FWWVVGLTVL GLVSSIFLPR HAPKPTAAPD GHAGDGEDEP
AAEGEHVPVG TPAPDPAV
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