Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_3652 |
Symbol | |
ID | 5672019 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 4329034 |
End bp | 4329600 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641242536 |
Product | regulatory protein TetR |
Protein accession | YP_001507956 |
Protein GI | 158315448 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGGCGAT GGGAGCCGAA CGCGAGAGGC CGGCTCAGCG AGGCGGCGAT GGAGCTCTAC GTCGAGCGCG GCTTCGAGCA GACGACCGTC GCCGAGATCG CCCAGCGGGC GGGGCTCACG GCCCGGACGT TCTTCCGCTA CTTCGCAGAC AAGCGCGAGG TGCTCTTCGC CGGCTCGACC ATCCTGGAGG AGCACCTGAT CGCCGCGCTC GAGAGCACCC CCGCCTCCGC GTCGCCGATG GAGGCCGTCG CGGCCGCCCT CGACGCGGCG GCGACGATGC TCGGCCAGCG GCGCGAGTTC TCCCGGCGGC GCCAGTCCGT CATCGCCGCC AACGCGGAGC TGCGTGAACG CGAACTGATC AAAATGGCGT CGCTGTCCGG TGCCCTCGCC GCGGGTCTGC GCCGGCGCGG CGTCGCCGAC TCGGACGCCA GCCTGGCCGC GGAGGCGGGG ATCGCCGTCT TCCGGGTGGC GTTCGAGCGT TGGGTCGGCG AGCCGACCGA CCGGGGCCTG ACGACGATCA TGCGCGAGTC GCTGGAACAG TTGAAGGCCC TCACAGCTGC CAGCTGA
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Protein sequence | MGRWEPNARG RLSEAAMELY VERGFEQTTV AEIAQRAGLT ARTFFRYFAD KREVLFAGST ILEEHLIAAL ESTPASASPM EAVAAALDAA ATMLGQRREF SRRRQSVIAA NAELRERELI KMASLSGALA AGLRRRGVAD SDASLAAEAG IAVFRVAFER WVGEPTDRGL TTIMRESLEQ LKALTAAS
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