Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_3645 |
Symbol | |
ID | 5672012 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 4318859 |
End bp | 4321204 |
Gene Length | 2346 bp |
Protein Length | 781 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641242529 |
Product | MMPL domain-containing protein |
Protein accession | YP_001507949 |
Protein GI | 158315441 |
COG category | [R] General function prediction only |
COG ID | [COG2409] Predicted drug exporters of the RND superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.197426 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGGA TCGCTGAACT CGCTGTCCGT CGCCGATGGT TCGTCGTCGT CGGCTGGGTT GTCTTCATCG TCGCGGTGCA GGGGATCGCC GGGGCGATGG GCGGGGCTTC GTACAAGGAC ACGTTCAGCC TCCCGCACAC CGAGACCGCG TCCGTCGCGA AGCTCCTCGA GGATGCCGGC CTGAACAATC AGAACGGCGC CCCGGGCACG GTTGTGATCA AGAACGAGAG CGGAACGCTC ACCGAGCCGC CACCGAAGCT GAAACCGGCC CTGGCCGAGG TGTGCGCTTC GGGTAACCAT GTGGCACTGA TCGCGTCGCC CTGGGAGTCG ATCGACTGCT CGAAGAGCGA TGCCGAAGCG CCGGGAAACC CACAGCTGCT CAACAGTGCG CGCGGCTCCA CCACGGCCCT GGTCACCATC ACCTGGGAGA ACGACCACTA CGACGCCGAG CTGTTCAAGA ACGTCTACGA TCAGCTGAAG ACGCTGCGCA GCGATTCGCT GCAGGTCGAG TTCACCGGTA ACGCCTTCAC CGGCATCGGG CAGAGCGACG GCTCGGGCTC GTCGGTGTTC ATCGGATTCG CGGCTGCCCT CATCATCCTG GCGCTGGTGT TCCGTACCGT GGCCGCCACG GTGCTGCCGC TGGCCAGCGC GGTGGCCGCG CTCGTCAGCG GCCTCGGCGT GATCTACATC CTCAGCCACG CCATCAACGT CTCCAACATC ACCCCGTACC TGGCCGAGCT GATGGTGATC GGCGTCGGCG TCGACTACGC GCTGTTCATC CTCACGCGGC ATCGCCGCAA CCTGCGGCGC GGCATGCCCG TCGCGGATTC GATCGTGAAC GCGCTCAACA CCTCCGGCCG GGCGGTGCTG TTCGCCGGTA CGACCGTGTG CATCGCCATC CTCGGTCTGA TCGCACTCGG GGTGAGCTTC TTCAACGGCA TGGCGGTGGC GACCGCGCTC GCGGTCGGCT TCACCATGAT TGCCTCGCTG ACGCTGCTGC CCGCATTGCT GGCCATCTTC GGCCTGAAGG TGCTGCCCCG CCGGCAGCGG GCGGCGGTGC GGGCCGGTGA GTTCATCGAT GACCGTCCGG TGGGGGGCTG GGCCCGGTGG TCGCGGTTCG TCGCTGGGCG CCCCGTCGTC GTCGCGATCG TCTCGGGCGC GATCATGGTC GCGATCGCGC TGCCGTTCTT CTCGATGGAG CTGGGCGCCA GCGATCAGGG CAGCGACCCG AAGAGCTCCA CGACCCGCGA CGGTTACGAC CTGATCGCCT CCGATTTCGG CGTCGGCTAC AACTCCACTC TGGAAGCCGT TGTGAGCGGC CCGGGCGCCT CGGACCAGGC CTACCTGCAG CGCGTGACAA AGACGCTGTC CGCTGTCCCG GGCATCGACC CGGGCAGCCT GGGCACGGTT CCGCTCGCTG AGAACGTCGC CTTCGTGACG TTCAAGACGA CCACGTCACC GCAGTCGGAG AAGACCTACG AGCTGGTCCG GCACCTGCGC TCGACCACCC TGCCGCCGCT GTACGACGGC ACGGCCAACC ACATCTACAC CTACGGTGAC ACGGCGATCA ACGTCGACTT CGCCGCGGTG CTTGCCCGGA AGATGCCGCT GTTCATCGCG GTCGTGGTCG GCCTGTCGTT CGTCCTGCTG CTCGTCGCGT TCCGGAGCCT GGTCATCCCG CTGACCGCCG CGGTGATGAA CCTGCTGGCA GCGGGCGGTT CGTTCGGTCT GGTTGTGGCG ATCTTCCAGT ACGGCTGGCT CTCCGACAGC ATGGGCGCCG GACCAGGCGG ACCGATCGAC GCCTGGATCC CGGTCATGCT GTTCGCCATC CTGTTCGGCC TGTCGATGGA CTACCAGGTG TTCCTGGTCA GTCGCATGCA TGAGGAATGG GTACACACCC GCGACAACAA GCGATCGGTG ACCATCGGGC AGGGCGAGAC CGGCGGCATC ATCACCGCCG CCGCCATCAT CATGATTGCC GTCTTCCTCG GCTTCGTGGT CAGCCCGGGC CGGCCGATCA AGATCTTCGG TACCGGCCTC GCCGCCGCCG TGTTCATCGA CGCGTTCGTT CTCAGGACAA TGCTCGTACC GTCGCTGATG CACATTGTCG GCAAGGCGAA CTGGTACCTT CCGAAATGGC TGGACCGCAT CACTCCGCGA GTCTCGGTCG AACCAGCCGA CGAGGCCGTC CCCCACAGCG TGGGCACCGG CTCCTTCGAC ACCGACCGGC CTGAAGGCGA CGACGACCGG CCTGAAGGCG ACACCGACCG GCCCGAAGAC GAGGTCGACC GGCCCGAAGA CGACGACGAC CGGCCCGAAG ACGAGCGGGA GCTGGCCCGC TCCTGA
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Protein sequence | MKRIAELAVR RRWFVVVGWV VFIVAVQGIA GAMGGASYKD TFSLPHTETA SVAKLLEDAG LNNQNGAPGT VVIKNESGTL TEPPPKLKPA LAEVCASGNH VALIASPWES IDCSKSDAEA PGNPQLLNSA RGSTTALVTI TWENDHYDAE LFKNVYDQLK TLRSDSLQVE FTGNAFTGIG QSDGSGSSVF IGFAAALIIL ALVFRTVAAT VLPLASAVAA LVSGLGVIYI LSHAINVSNI TPYLAELMVI GVGVDYALFI LTRHRRNLRR GMPVADSIVN ALNTSGRAVL FAGTTVCIAI LGLIALGVSF FNGMAVATAL AVGFTMIASL TLLPALLAIF GLKVLPRRQR AAVRAGEFID DRPVGGWARW SRFVAGRPVV VAIVSGAIMV AIALPFFSME LGASDQGSDP KSSTTRDGYD LIASDFGVGY NSTLEAVVSG PGASDQAYLQ RVTKTLSAVP GIDPGSLGTV PLAENVAFVT FKTTTSPQSE KTYELVRHLR STTLPPLYDG TANHIYTYGD TAINVDFAAV LARKMPLFIA VVVGLSFVLL LVAFRSLVIP LTAAVMNLLA AGGSFGLVVA IFQYGWLSDS MGAGPGGPID AWIPVMLFAI LFGLSMDYQV FLVSRMHEEW VHTRDNKRSV TIGQGETGGI ITAAAIIMIA VFLGFVVSPG RPIKIFGTGL AAAVFIDAFV LRTMLVPSLM HIVGKANWYL PKWLDRITPR VSVEPADEAV PHSVGTGSFD TDRPEGDDDR PEGDTDRPED EVDRPEDDDD RPEDERELAR S
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