Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_3588 |
Symbol | |
ID | 5671957 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 4250185 |
End bp | 4251327 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641242474 |
Product | Propanoyl-CoA C-acyltransferase |
Protein accession | YP_001507894 |
Protein GI | 158315386 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0183] Acetyl-CoA acetyltransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.193067 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.417277 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAGCGGCG TACTGATCGC CGGCGCCGCG CGGACGTCGT TCGCGCGGTC TGAGCGCAGC GGGCGCCAGC ACGCTGTGGC TGCGGTGCAC GCGGCGCTCG AGGACGCGGG CCTGCCTTGG TCGCGGGTCC GGGCCGCGTT CGGCGGCAGC GACGCCGCCG GGCTCGCGGA CACCCTCGTC GCCGATCTGG GACTGACCGG CGTGCCGTTC CTCAACGTCA AGAACGGCTG CGCGACCGGG GGAAGCGCGC TGGTGTCGGC GGTGAACGCG ATCCGGTCCG GTATGGCCGA CGTCGTGCTC GCCGTCGGCT TCGACAAGCA TCCTCGGGGG GCCTTCGCCC CGATGCCCGA GGACTGGGGG CTCGACGCCG CCTACGGCCG CAACGGGCTC ATGGTGACCA CGCAGTTCTT CGGGATGAAG ATCCAGCGGT ACGCCCATGA CCACGGCGTC ACCGCGCGCA CCCTCGCGCG GGTGGCCGAG AAGGCCTACC GCAACGGCGC GCTGACGCCG CAGGCCTGGC GCCGCACGCC GCTCACCGCC GACGAGGTGC TCGCGTCCGG CATGGTGAAC GACCCGCTCA CCCGCTACAT GTTCTGCTCG CCGGGGGAGG GCGCCGCCGC GGTTGTGCTC TGCACGCCGT CCGTGGCCGC CGAGCTGGCC AACCGGCCGG TCACGCTGCG GGCCGCCGAG GTCCGCACCC GCCAGTTCGG CACCTTCGAG GTATTCAGTC CCTGGATCCC GGCCGGCGAG CTGACCAGTG TCAGCCGCGC CGCCGCCGCC GCGGCCTTCG AGGCCGCTGG CGTCGGACCG GACGAGATCG ACGTCTGCCA GCTCCAGGAC ACCGAGGCCG GAGCGGAGGT CATGCACATG GCCGAGTGCG GGTTCTGCGC CGATGGCGAT CAGGACAAGC TCATTGCCGA GGGCGCCACC GACATCGGCG GGTCGCTGCC GGTGAACACC GACGGCGGAT GCATCGCCAA CGGCGAGCCG ATCGGGGCAT CCGGCCTGCG CCAGGTTGTC GAGGTGGTCA CGCAGCTGCG CGGGCAGGCC GGACAGCGCC AGGTCCCCGG GACACCGCGG CTCGGCTTCA CCCACGTCTA CGGTGCGCCG GGTGTCAGTG CCTGCACCGT GCTGTCGGTC TGA
|
Protein sequence | MSGVLIAGAA RTSFARSERS GRQHAVAAVH AALEDAGLPW SRVRAAFGGS DAAGLADTLV ADLGLTGVPF LNVKNGCATG GSALVSAVNA IRSGMADVVL AVGFDKHPRG AFAPMPEDWG LDAAYGRNGL MVTTQFFGMK IQRYAHDHGV TARTLARVAE KAYRNGALTP QAWRRTPLTA DEVLASGMVN DPLTRYMFCS PGEGAAAVVL CTPSVAAELA NRPVTLRAAE VRTRQFGTFE VFSPWIPAGE LTSVSRAAAA AAFEAAGVGP DEIDVCQLQD TEAGAEVMHM AECGFCADGD QDKLIAEGAT DIGGSLPVNT DGGCIANGEP IGASGLRQVV EVVTQLRGQA GQRQVPGTPR LGFTHVYGAP GVSACTVLSV
|
| |