| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3587 |
|---|
| Symbol | |
|---|
| ID | 5671956 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 4249787 |
|---|
| End bp | 4250188 |
|---|
| Gene Length | 402 bp |
|---|
| Protein Length | 133 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641242473 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001507893 |
|---|
| Protein GI | 158315385 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1545] Predicted nucleic-acid-binding protein containing a Zn-ribbon |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.645775 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.381566 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACAA TCGGCACCGG CGCGCCGCTG GACACCCAAC CGGTGCGTCT GGAGGGCTCG
CGGTGCGCCG GCTGCCCGGT CGTGACCTAC CCGGCTGCGG CAGGCTGCCC AAGGTGCGGG
GGCGGGATGG ACCGGATCCA GCTCTCCGAG CACGGCGCCG TCTGGACGTG GACGGTGCAG
CGGTTCGTGC CCAAGTCACC GCCCTACGTC CCGCCGCCGG GCGGGTTCGC CCCGTTCGCG
GTCGGCTACG TGGAGCTGCC CGAGGGCGTC CGGGTCGCCG CGGTCATCAA GGCCGACCCA
GAACGGATCA GCATCGGGAT GCCGGTCCGG GTGGGGGTGA CGGACGGCGT CCCACGCGCA
ACCCCGTCCG CCACCTCGTC CGAGCAGGAG GGAGACCAGT GA
|
|---|
| Protein sequence | MTTIGTGAPL DTQPVRLEGS RCAGCPVVTY PAAAGCPRCG GGMDRIQLSE HGAVWTWTVQ
RFVPKSPPYV PPPGGFAPFA VGYVELPEGV RVAAVIKADP ERISIGMPVR VGVTDGVPRA
TPSATSSEQE GDQ
|
|---|
| |