Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_3408 |
Symbol | |
ID | 5671779 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 4038519 |
End bp | 4039307 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641242296 |
Product | integrase catalytic region |
Protein accession | YP_001507716 |
Protein GI | 158315208 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3316] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGGTG TGCCGACGGA CTCTGTTGCA TCGGCGGAGT CCGCTGTCCG GCGGCCGTCG ATCATTCATG ATCGAGTGAT GCGTCGACGT CGTGTCCGTC CACCGGTTCC GACGTCGGAG TTCGCGGGGT TCCGGTTCCC ACCCGAGGTG ATCGTCTTGG CGGTCCGCTG GTACCTCCGG TACGCGCTGT CGTACCGGGA TGTCGAGGAG CTGCTCGCCG AACGTGGCCT CGAGGTTGAT CACGTGACCG TGTACCGGTG GGTGCAGCGC TTTACGCCCC TGCTGGTCGA GGCCGCGCGG CCGTGTCGGC ACCGTTCTGG GGATAGGTGG TTTGTGGATG AGACGTATGT GAAGGTCGCC GGCCGGTGGA CCTATGTGTA CAGGGCGGTT GACCAGCACG GGCAGGTCAT CGACGTCCTG GCCAGCGCCC GCCGCGACCA GGCTGCGGCA CGCCGCTTCT TCGTCCGTGC GCTGTCCCAT GGGCATCGGC CGGTCGAGGT CACCACCGAC AAAGCACCCG TCTACCCACG GGTCCTCGAC GAATTCTTGC CCGAGGCGTG CCACGTCGAC GCCGCCCGGG AGAACAATCG GATCGAGGCC GACCACGGCC GGCTCAAAGC CCGGCTCCGG CCGATGCGCG GCCTGAAACG GCTGCGCTCC GCCCAGACGA TCAGCGCAGG GCATGCGTTC GTCCAGAACA TCCGCCGCGG CCACTACGAA CTCGGGATCG ACACCGCCCC CCACGCACGG GTGACGGCCG CGTTCACCGA GCTCACCCTC GCGATCTGA
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Protein sequence | MAGVPTDSVA SAESAVRRPS IIHDRVMRRR RVRPPVPTSE FAGFRFPPEV IVLAVRWYLR YALSYRDVEE LLAERGLEVD HVTVYRWVQR FTPLLVEAAR PCRHRSGDRW FVDETYVKVA GRWTYVYRAV DQHGQVIDVL ASARRDQAAA RRFFVRALSH GHRPVEVTTD KAPVYPRVLD EFLPEACHVD AARENNRIEA DHGRLKARLR PMRGLKRLRS AQTISAGHAF VQNIRRGHYE LGIDTAPHAR VTAAFTELTL AI
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