| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3349 |
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| Symbol | |
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| ID | 5671720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 3962038 |
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| End bp | 3963924 |
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| Gene Length | 1887 bp |
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| Protein Length | 628 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 641242237 |
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| Product | SARP family transcriptional regulator |
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| Protein accession | YP_001507657 |
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| Protein GI | 158315149 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3629] DNA-binding transcriptional activator of the SARP family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGATCG AGGTGCTGGG CGCGGTGAGG GCACGTCGCG AGGACGGGAC CGAGATCGAC
CTGCGTGGCC CCCGGCACCG TGAGGTCCTT GCCCGCCTCG TCGCCGCCGA CGGACGGATG
GTCGCCACCG ACGCCCTTGT CGCCGACCTG TGGCCCGACC CGCCGGCCGG TGCCGTCGGC
GCCCTCCGCA CATTCGTCGC CGCCCTGCGC CGCGCCCTCG AGCCCGAGCG CCCGCCCAGG
ACGCCCCCAC GTGTGTTGGT GACCGAGGGG CCCGGTTACG CGCTGCGCCT GCCACGGGCG
GACGTCGACG CCCACCGCTT CGAGGACGCG CTCGCCGCCG CCCGGCGCTC GTCCGACGCG
TTCGCGCCGC TCGGCGTGGC GCTCGCCGCG TGGCGCGGAC CGGCCTACGC CGGCCTGCCC
GACGCCGGGT GGGTGCGCGG CGAGCGCCGC CGACTCGAGG AGCTGCGGCT GCAGGGCGTG
GAGCTGCAGG CGGGCATCCT GCTCGATCGC GGCCAAGGGG CCGATCTCGT CGCCGAGCTC
GACGCGCACG TCACCGAGCA TCCGTGGCGC GAGCCGGCGT GGGGACTGCT CGCCCGCGCC
CTCTATCGCG CCGGGCGCCA GGCCGACGCG CTCGCCACGC TCCGGCGCGC CCGCGCGATG
CTCGTCGACC AGCTCGGGCT CGACCCGAGC CGCGCACTGC GCCGGCTTGA AGCGGACATG
CTCACCCAGT CGCCCGCCCT CGAACCGCGA GTCTCCGAAT GGCCGGCCAT CACCGCCCGT
CTCGGCCCAC GCACGACCGT CGACGTCGCG CGCGCCCTGG CCCTCGCGGG CGGCGACGCG
CTCGTGTCCT CCCGGCGCGA CCGGCTCGCC GCCGCGCTCG CCGCGGAACG AACGGGCGAT
GTCGCGCTGA CCGCCCGCGT CATCGGTGCC TACGACGTGC CCGCGATCTG GAACCGTGCC
GATGACCCGG TACAGGCCCG CGCCGTCGTC GCCGCGGCCG AACGCACGCT CGCCACGCTC
GGCCCCGCCG CGCCCGCCGA CCTGCGGGCC CGGCTCCTCG CCACGATCGC CGTCGAGAGC
CGCGCCGAGG ACGCCGCCGG GCCGGCACGG GAGGCTGAGG CGTTGGCACG GTCTCTCGGT
GATCCCGCCC TGCTCGCCTT CGCGCTCAAC GGCGTCTTTC TGCAGTCCTT CTCCCGGCCG
GGACTCGCGC AGCGGCGCGA CGACATCGGA GCGGAACTCG TCGCGGTGTC CACCCGGCAC
GGGCTGCCCA CCTTCGCGAT TCTCGGCCAT CTCGTACGCC TGCAGTCGGC GTCGGCCCGC
GGTGATCTCG ACGCTGGCTC CCAGCACGCG GCCGCGGCCG AGCGGCTCGC CACCGAGCAC
GAGTCGCCGC TCGTGCCGGT GCTCACCAGG TGGTTCCGGG CGCTCGTCAT CGCGGCCCGC
AGCGCCGCGC CCGGCGGGCC GTCCGCCGCC GCGGCCGCGG CCGCCTACCG AGCCGCCGAC
ACCGCGCTCG AACAGGCCGG CATGCCGGGC CTGCACCGCG GCCTGCTACC GCTCGCCCTG
CTCGGGCTCC GTCTGCTGCA CGACCGCCCC GCCCCGATCG ACCCACGGCT GGACTGGGGC
CCGTACACGC CGTGGGCGGC ACCGCTCGTG CTCCTCGCGC AGGACCGTCG AGAACAGGCA
CGAGCCGCCC TCGCCGCGAC GCCCGAACCG CCGCACGACC ACCTCCAGGA GGCGCTCTGG
TGCCTCACCG CCCACGCCGC CGCCCAGCTC GGCGAGCACG CGATCGCCGG GCGGGCCGCG
GCGGCCCTGC GGCCCGCCCG CACCGAACAC GCCGGCGCCG CCAGCGGCAT GCTCACACTC
GGCCCGGTGG CGCGCTACCG CGACTAG
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| Protein sequence | MRIEVLGAVR ARREDGTEID LRGPRHREVL ARLVAADGRM VATDALVADL WPDPPAGAVG
ALRTFVAALR RALEPERPPR TPPRVLVTEG PGYALRLPRA DVDAHRFEDA LAAARRSSDA
FAPLGVALAA WRGPAYAGLP DAGWVRGERR RLEELRLQGV ELQAGILLDR GQGADLVAEL
DAHVTEHPWR EPAWGLLARA LYRAGRQADA LATLRRARAM LVDQLGLDPS RALRRLEADM
LTQSPALEPR VSEWPAITAR LGPRTTVDVA RALALAGGDA LVSSRRDRLA AALAAERTGD
VALTARVIGA YDVPAIWNRA DDPVQARAVV AAAERTLATL GPAAPADLRA RLLATIAVES
RAEDAAGPAR EAEALARSLG DPALLAFALN GVFLQSFSRP GLAQRRDDIG AELVAVSTRH
GLPTFAILGH LVRLQSASAR GDLDAGSQHA AAAERLATEH ESPLVPVLTR WFRALVIAAR
SAAPGGPSAA AAAAAYRAAD TALEQAGMPG LHRGLLPLAL LGLRLLHDRP APIDPRLDWG
PYTPWAAPLV LLAQDRREQA RAALAATPEP PHDHLQEALW CLTAHAAAQL GEHAIAGRAA
AALRPARTEH AGAASGMLTL GPVARYRD
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