Gene Franean1_3311 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3311 
Symbol 
ID5671683 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp3923105 
End bp3923512 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content70% 
IMG OID641242200 
Producthypothetical protein 
Protein accessionYP_001507620 
Protein GI158315112 
COG category[R] General function prediction only 
COG ID[COG1545] Predicted nucleic-acid-binding protein containing a Zn-ribbon 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.367067 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGGCG AGGACAGGCC CATACCCGTG GTCGACGACG ACAGCCGCGA CTTCTGGCAT 
GGAGGTGCCC AGGGGCAGCT CCTGATCAGC GCCTGCACCG CGTGCGAACG ACTGTTCCAC
CCGCCGGCGC CGATCTGCCC CGGCTGCTAT TCCCGTTCGA TCGGGTTCCG GCCGGTCTCG
GGCCGCGGCA CCGTCGAGAC CTACACGGTC GTCCGCCGCC CGTGGGTGCC CGGCTACGAG
CCGCCCTACG TCGTGGCCCG GGTGGTCCTC GCCGAGCAGC CCGACCTGCG CCTGCTGACC
AACCTGGTCG ACTGCGACGT CGAGGCGGTC ACGACCGGCA TGGAGGTCGA GGTGGCCTTC
GAGCAACGAG GTGACGTGTT CGTACCGATG TTCCGGCCGA TCCCATGA
 
Protein sequence
MTGEDRPIPV VDDDSRDFWH GGAQGQLLIS ACTACERLFH PPAPICPGCY SRSIGFRPVS 
GRGTVETYTV VRRPWVPGYE PPYVVARVVL AEQPDLRLLT NLVDCDVEAV TTGMEVEVAF
EQRGDVFVPM FRPIP