Gene Franean1_3297 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3297 
Symbol 
ID5671669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp3908445 
End bp3909851 
Gene Length1407 bp 
Protein Length468 aa 
Translation table11 
GC content70% 
IMG OID641242186 
Productaldehyde dehydrogenase 
Protein accessionYP_001507606 
Protein GI158315098 
COG category[C] Energy production and conversion 
COG ID[COG1012] NAD-dependent aldehyde dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGACG TGTCAATGAT CATCGGTGGG GAGCGCCGGG CCGCCCCGTC GACCTTCGGT 
GTTGTGAATC CGGCGACGGG CGAGGTCCAC GCGGATGCGC CGGACTGTGA TGAGGGCCAG
CTGAACGAGG CGTTCGACGC CGCGGCCAAG GCATTCACCG ACTGGCGCAC CGACGAGGAC
GCGCGCCGCT CCATCCTGCG CGAGGCATCG AAGCGACTCT CGGCGGCGGC GGACCGGATC
GCCCCGGTCC TGACCGCCGA ACAGGGCAAG CCGCTCAGAT CTGCGCACAT GGAGGTGCTC
GGCGCCGGCT ACTGGCTGAG GTACTTCTCC CGCCTGGAGA TCCCGCGCGA GGTCATCCAG
GACGACGAGC ATGTCCGCGC CGAGGTGGTG CACCGCCCGA TGGGCGTCGT CGCGGCCATC
ACGCCGTGGA ATTTCCCGAT CATGCTGTCG GCCTGGAAGC TCGGACCGGC GCTACTCGCC
GGGAACACGG TCGTGCTGAA GCCGTCGCCG TTCACTCCGC TCAGCACCCT GCTGATGGGC
GAGATCCTCA GCGAGGTGCT CCCACCGGGT GTGCTCAACG TCGTCTCAGG CGGAGATCAG
CTGGGCCGGT GGATGACCTC CCATCCGGTC CCGCGGAAGA TCAGCTTCAC CGGGTCGACC
GGGACCGGCA AGCACATCGC CGCCTCGGCG GCCCCTGACC TCAAGCGCCT CACTCTGGAG
CTCGGCGGGA ACGACGCCGC GATCCTTCTC GACGATGTCG ATCCCGCCGC CATCGTGCGG
AAGCTTTTCG AGGGGGCCTT CGACAACAGT GGGCAGGTCT GCTCGGGCAT CAAGCGCCTT
TACGTTCCCG AATCGTTGCA CGATGTCGTC GTCGACGCTC TCGCGGCCCA GGCCGCGGCG
GCCCGGGTCG GTGACGGCAT GGACCCGGAC ACCCAGGTGG GCCCGATCCA GAACCGCCCG
CAGTACGAGC GGGTCTGCGA CCTGGTCGCC GAGGCGCTGG CGGGTGGCGC GACGGCGGCG
GCCGGCGGCG CCCCGATCGA CGGCCCCGGC TACTTCTTCC CGCCGACCGT GCTCGTCGGG
GCGGCCGAGG GCACCCGGAT CGTCGACGAG GAGCAGTTTG GACCGGTGCT GCCGGTGCTG
CCGTACCGGG ACATCGACGA AGCGGTCGCC CGGGCCAACG CCACGAACTA CGGGCTTTCC
GGTTCGGTCT GGTCCGCGGA CCCGGATCGG GCCGGCGCCG TCGCCGAGCG CCTGGACTGC
GGCACCGCCT GGGTCAACGC CCATGTGGCA CTCGGCCCCC ATCAGCCCTT CGGCGGTCTC
AAATGGAGCG GCGTCGGGGT GGAGAACGGG CCCTGGGGGC TCGCGGGCTA TACCGACCTC
CAGGTCCAGT ACCGCGCCAA GGACTGA
 
Protein sequence
MSDVSMIIGG ERRAAPSTFG VVNPATGEVH ADAPDCDEGQ LNEAFDAAAK AFTDWRTDED 
ARRSILREAS KRLSAAADRI APVLTAEQGK PLRSAHMEVL GAGYWLRYFS RLEIPREVIQ
DDEHVRAEVV HRPMGVVAAI TPWNFPIMLS AWKLGPALLA GNTVVLKPSP FTPLSTLLMG
EILSEVLPPG VLNVVSGGDQ LGRWMTSHPV PRKISFTGST GTGKHIAASA APDLKRLTLE
LGGNDAAILL DDVDPAAIVR KLFEGAFDNS GQVCSGIKRL YVPESLHDVV VDALAAQAAA
ARVGDGMDPD TQVGPIQNRP QYERVCDLVA EALAGGATAA AGGAPIDGPG YFFPPTVLVG
AAEGTRIVDE EQFGPVLPVL PYRDIDEAVA RANATNYGLS GSVWSADPDR AGAVAERLDC
GTAWVNAHVA LGPHQPFGGL KWSGVGVENG PWGLAGYTDL QVQYRAKD