| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3280 |
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| Symbol | |
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| ID | 5671653 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 3887536 |
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| End bp | 3888309 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641242171 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001507591 |
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| Protein GI | 158315083 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGCAT CGGAACTGTT CGATCTCACG GACAAGGTCG CCGTCATCAC CGGAGGCGCC
GGCGGCATCG GCGTGGTGTA TGCGGATGCG CTGTGTCAGG CCGGAGCCTC GGTTCTCGTG
GCGGACCTCG ACGGGGCAGC GGCGCAGCGG ACCGCCGCCT CGCTGTCCGA GAAGGGGTTC
CAGGCCGTCG GCGCGCAGGT CGACGTCGCC TCCCCCGAGT CGACCCAGGC CATGGCCGCG
GCTGCCGTCG AGGCCTTCGG CGGCGTCGAC ATCCTCATCA ACAACGCCGC GATCATGACG
GAATTGCCCC CGTACGGGCT GTCCAACATG CCGGTGCGTG ACTGGGACCG TGTCATGGAG
GTGAACCTGC GCGGCCCGCT GCTGTGCGTG CAGGCGGTCC TGGAGTCGAT GATCGCCCGC
GGCGGGGGCC GCATCGTCAA CGGCCTGTCA GCCGGCGCCT TCCTGCCCGG AGGCATCTAC
AGTGTCAGCA AGTTCGCACT GCACGGGCTG ACCGTGAACC TGGCCTCCGA GCTGGGCGGC
CACGGCATCA ACGTCAACGC CATCGCCCCA GGGCTCGTCG ACAACGAGTC CGCCTACGTC
AGCCTGCCGA AGGACTCGCC GTTCCGCGCG GCCGCCTACG CCGGCATCCC GGGGAAGAAG
TCCGGCCCGC CGGAGGACCT CGTCGGCGCG CTTCTCCTCC TCTGCTCGAA GGCAGGCGAC
TGGATCACCG GTCAGACGAT GGTCGTCGAC GGCGGATGGA CCAAGCGCCT CTGA
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| Protein sequence | MTASELFDLT DKVAVITGGA GGIGVVYADA LCQAGASVLV ADLDGAAAQR TAASLSEKGF
QAVGAQVDVA SPESTQAMAA AAVEAFGGVD ILINNAAIMT ELPPYGLSNM PVRDWDRVME
VNLRGPLLCV QAVLESMIAR GGGRIVNGLS AGAFLPGGIY SVSKFALHGL TVNLASELGG
HGINVNAIAP GLVDNESAYV SLPKDSPFRA AAYAGIPGKK SGPPEDLVGA LLLLCSKAGD
WITGQTMVVD GGWTKRL
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