Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_3269 |
Symbol | |
ID | 5671643 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 3869841 |
End bp | 3872339 |
Gene Length | 2499 bp |
Protein Length | 832 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641242161 |
Product | MMPL domain-containing protein |
Protein accession | YP_001507581 |
Protein GI | 158315073 |
COG category | [R] General function prediction only |
COG ID | [COG2409] Predicted drug exporters of the RND superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.930257 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATCGGGT ACGGGGTGGA GCGTCGCGTC GCCGAAAGAC TCGGCACGGT CGATGGCGGT CCCGCGCCTG GCCAGCAGTT CTTCGGTATC GGCCCGTCCC CTCCTGGCGA GGCAACAAGC ATCACACTTA CCGGACGGCA GGTTGCTAAC CGGCCGTTCA GTTGGTACTC CTGGGGGTGT CCAGCGAAAA CAGCCGGAGA CGACCACCTG CCGATCGGCA AGCACCAGCC GGCCGGGGCA CTCCCCTCCC GCCCGGGAAC CCTCCCCGAG GAGACATCTG AAGTGGCCAC CTACCTGTAC CGGCTTGGAC GGCTGGCGTA CCGGCGCCGC CGCCTTACCA CAGCCCTGTG GCTGGCGGCG CTGGCGCTTG TCGGCGTCGG CGCGGCGGCC CTGTCCGGCC CGACATCGGA CGCGTTCTCG ATTCCGGGCA GCGAATCCCA GCAGGCCTTC GACCTGCTGG CCGAGCGGAT GCCCGGGGGC GGTGCGGACA ACGCCTCGGC CCGCGTCGTC TTCACCGCTC CCGAGAACGG CACGCTGAGC ACCGGGCCGG GCCGGGCCGG GGTCGAACAG ACCGTCGCCG CGCTCGGGCA GGCCCCCCAG GTCGCCAGCG TGACCGACCC GTTCACGGCG GATGGCGTCG CCGAGGACGG CCAGACCGCC TACGCCCAGG TCACCTACTC AGTGCAGAGC GTCGACGTCA CCGAGGAGGC GCGCGAGGGC CTGTTCCACG CCGCCGCCCC GGCCGAGGCC GCCGGTCTCG CCGTCGAGTA CGGCGGGACG GCGATGGAGG AGGTGCCCGA GCAGAGCGCC ACTGAGATCA TCGGGCTGCT CGTCGCGGCG GTGGTGCTGC TCATCACCTT CGGTTCGCTG GTCGCGGCCG GGCTCCCGCT CCTCACCGCC GCGCTCGGCG TCATCTTCGG GATGGCCGGG ATCCAGATCG CGACCGGTTT CTTCGATCTC GGTTCCAGCA CCTCGACGCT CGCCCTGATG CTCGGGCTCG CAGTCGGCAT CGACTACGCA CTGTTCGTCA CCTCCCGGTA CCGGCACGAG ATCAGCCTTG GTCTCGAGGG CGAGGAGGCC GCCGGGCGCG CGGTCGGCAC CGCCGGCTCC GCGGTCGTGT TCGCCGGGCT GACCGTCGTC ATCGCGCTGG CCGCGCTGGC CGTCGTGGGC ATCCCGTTCC TGACCTCGAT GGGGCTGGCC GCGGCGGGGA CGGTGGCGAT CGCCGTCGTG ATCGCGTTGA CCATGCTGCC CGCCATGTTC GGTTTCGCCG GCGGACGGAT CGCCGGCGGC CGGGTAGCGG GACTGCGCGG CCGCGACCCG GAGGACAGCG GCCCCCGGGT GGCCATGGGG GAGCGGTGGG CGCGGCTGGT CGTCCGCCGC CGGGTCCCCG CCCTGCTTCT GGGCGTGCTG GTGCTCGGCC TGGTTGCCCT GCCCGCCACC GACCTGCGGC TCGGGATGCC CGACGACAGC ACGGCAGCCG AGGACACCAC TCAGCGCAAG GCCTACGACC AGCTGGCCGA GGGATTCGGT CCCGGCTTCA ACGGCCCGCT GCTGCTGGTC GTCGACGTCG CCGGAAACCC TGCCCCGCAG GGAGTGGTCG AGCGTGTGCG GCAGGCTGCG GCCGCGCTGC CGGGCGTCGT CACCGTGACG GCGCCGGTCT TCAACCAGGC CGGGGACACC GCCACTCTCA GCGTGGTGCC GGCCACGGGG CCCAGTGACA AGGCGACCGA GGACCTCGTC CACGCACTCC GCGACTCCGC CAGCGCCGCC ACCGCGGTCG GTGGTGCCGC CAGCTACGTC ACCAGCTCCA CCGCGATGAA CATCGACGTC TCGGAGACAC TGTCCGACGC GCTCCTGCCC TACCTGGCCG TCGTCGTCGG GCTGGCCTTC GTGCTGCTGG CCCTGGTGTT CCGCAGCATC CTGGTGCCGT TGAAGGCCAC TGTCGGCTTC CTGCTCAGCG TGGTCGCCAC GTTCGGCGCG GTGGTCGCGG TGTTCCAGTG GGGCTGGATG ATGGACCTGC TCGGCGTCGA CTCCACCGGC CCGATCGTCA GCTTCCTGCC GATCTTCCTG ATCGGCGTGC TCTTCGGCCT GGCGATGGAC TACGAGGTGT TCCTGGTCAC CAGGATGCGG GAGGAGTACG TCCACGGCCA GGCTCCCGAC GACGCGGTCG TGCTCGGTTT CCGGCACGGA GCCCGAGTGG TCACTGCCGC CGCGATCATC ATGATCTCGG TCTTCGCCGG GTTCATCCTC GCACCCGAAC CGATCATCCA GTCGCTGGGT TTCGCCCTGG CGTTCGGTGT CCTCGTGGAC GCGTTCGTCA TCCGGATGAC TCTGGTGCCC GCGGTGATGT CGCTGCTCGG CCGGCACGCC TGGTGGCTGC CGAGATGGCT GGACCGTGCC CTGCCCGACA TCGACGTCGA GGGCAGCCGG CTGGAGCAGG CTGTCGCCAC GCAGGGCCAG CCCCGGGAAC CCCGGGAATC GGAACTCGTC CGCGGCTGA
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Protein sequence | MIGYGVERRV AERLGTVDGG PAPGQQFFGI GPSPPGEATS ITLTGRQVAN RPFSWYSWGC PAKTAGDDHL PIGKHQPAGA LPSRPGTLPE ETSEVATYLY RLGRLAYRRR RLTTALWLAA LALVGVGAAA LSGPTSDAFS IPGSESQQAF DLLAERMPGG GADNASARVV FTAPENGTLS TGPGRAGVEQ TVAALGQAPQ VASVTDPFTA DGVAEDGQTA YAQVTYSVQS VDVTEEAREG LFHAAAPAEA AGLAVEYGGT AMEEVPEQSA TEIIGLLVAA VVLLITFGSL VAAGLPLLTA ALGVIFGMAG IQIATGFFDL GSSTSTLALM LGLAVGIDYA LFVTSRYRHE ISLGLEGEEA AGRAVGTAGS AVVFAGLTVV IALAALAVVG IPFLTSMGLA AAGTVAIAVV IALTMLPAMF GFAGGRIAGG RVAGLRGRDP EDSGPRVAMG ERWARLVVRR RVPALLLGVL VLGLVALPAT DLRLGMPDDS TAAEDTTQRK AYDQLAEGFG PGFNGPLLLV VDVAGNPAPQ GVVERVRQAA AALPGVVTVT APVFNQAGDT ATLSVVPATG PSDKATEDLV HALRDSASAA TAVGGAASYV TSSTAMNIDV SETLSDALLP YLAVVVGLAF VLLALVFRSI LVPLKATVGF LLSVVATFGA VVAVFQWGWM MDLLGVDSTG PIVSFLPIFL IGVLFGLAMD YEVFLVTRMR EEYVHGQAPD DAVVLGFRHG ARVVTAAAII MISVFAGFIL APEPIIQSLG FALAFGVLVD AFVIRMTLVP AVMSLLGRHA WWLPRWLDRA LPDIDVEGSR LEQAVATQGQ PREPRESELV RG
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