| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3115 |
|---|
| Symbol | |
|---|
| ID | 5671493 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 3670806 |
|---|
| End bp | 3671294 |
|---|
| Gene Length | 489 bp |
|---|
| Protein Length | 162 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641242012 |
|---|
| Product | transposase IS4 family protein |
|---|
| Protein accession | YP_001507432 |
|---|
| Protein GI | 158314924 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.989932 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAACGGC GCCCCCGGGA CCAGATCGCG ATCGTGGACG GCACGCTCAT CCCGACCCGC
GACCACACCC TGGCCGCCCC GTCGAAGAAC TACCGGTACT CGACGAACCT GCAGGTCGCG
ATCGACGCGG ACACCCGCCT CGTGATCGCC CTGGGTGACC CCCAGCCCGG AAACCGCAAC
GACACGATCG TCTACCAGAC CAGCGGGATC AAAGACCGCC TCGCCGGACG ACCTGTCATG
GCCGACGGCG GCTACCAGGG CCACCCAGAT GTGATCATGC CGTATCGGAA ACCGGCCGAC
GGACAGCCGC TGCCAGAGTG GAAGGAGGAA CTCAACCGGG TGCACCGCAA GGTCCGGGCC
CGCGTCGAAC ACACCCTCGC CGGGATGAAG CCCTGGAAGA TCCTGCGTGA CTACCGCCGC
CAGGCCCGCA CCCTCGGGAC CACCGCCGCC GGGATCGCCC ATCTATACAA CATCAGCCGG
GCCGGCTGA
|
|---|
| Protein sequence | MKRRPRDQIA IVDGTLIPTR DHTLAAPSKN YRYSTNLQVA IDADTRLVIA LGDPQPGNRN
DTIVYQTSGI KDRLAGRPVM ADGGYQGHPD VIMPYRKPAD GQPLPEWKEE LNRVHRKVRA
RVEHTLAGMK PWKILRDYRR QARTLGTTAA GIAHLYNISR AG
|
|---|
| |