Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_2889 |
Symbol | |
ID | 5671276 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 3404258 |
End bp | 3404767 |
Gene Length | 510 bp |
Protein Length | 169 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641241796 |
Product | hydratase/decarboxylase |
Protein accession | YP_001507216 |
Protein GI | 158314708 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3971] 2-keto-4-pentenoate hydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCGACGG AGTCGACCGG TTTTTGTCAG CCGCGCATCG AGCCGGAGAT CTGCTTCCGA TTGGCCCGGC CGCTACGCGG CCCCGATGTC ACCATCGCGG ACGTGCTGAG TGCAACCGAG GCCGTCGCGC CCGCGCTGGA GATCGTCGAC AGTCGGATCC GCGACTGGAA GATCACATTG GTCGACAGGG TCGCCGACAA CGCCAGCGCC GCCGGGCTGG TCTACGAGGC CTGGACATCT CTGGACAATG TTCTTGATCT TGCTGCTGTC ACCGTCGACC TGATCGTCGA TGGAGACCGC GTAGTGACAG GCAGCGGACG GGAGGTCCTT GGCCATCCCG CCGCCGCAGT CGCCTGGCTG GCCAACAGCC TCGCCACCTT CGGTACCGCA CTGGAATCCG GGCACCTGGT ACTGCCCGGC GCCATGACCA CCGCCCCCTT CATCAGCGCT GGCCAGAAGA CCGAAGCGAG CTTCAGCGCC CTAGGCTCGG TCTCGGTGAC TCTGATCTAA
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Protein sequence | MATESTGFCQ PRIEPEICFR LARPLRGPDV TIADVLSATE AVAPALEIVD SRIRDWKITL VDRVADNASA AGLVYEAWTS LDNVLDLAAV TVDLIVDGDR VVTGSGREVL GHPAAAVAWL ANSLATFGTA LESGHLVLPG AMTTAPFISA GQKTEASFSA LGSVSVTLI
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