Gene Franean1_2825 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2825 
Symbol 
ID5671214 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp3342621 
End bp3343661 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content66% 
IMG OID641241734 
Productradical SAM domain-containing protein 
Protein accessionYP_001507154 
Protein GI158314646 
COG category[R] General function prediction only 
COG ID[COG0535] Predicted Fe-S oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCACCT CCTCTCCACC TCCTCCAACC GTTGATGCTG AGGTGCAGCC GGGCCCCGGT 
GAGATCTGCG CGCCTACTGC CGAGCCTGTC GTCTTCACCG ATGGGCACCA TTTCAGGCTG
AGGGCTCCGC TCGATCTGGA GACGGTCGCA GCCGGAGCTG CTGGGCCGCT GTCGGTGATC
CTTCAGGTCA CGAAGCGGTG CAATTTCGAC TGCTCGTTCT GCTCCGAGAC GCTCCAAGAA
CGAGATCCCT CGCTGGGCGC GCTGGAGAGG ATTCGGGACA ACCTGGCCGG GGTGCCCCGG
GTGTTTTTGT CCGGAGGTGA GCCGCTGCTG CGTCGGGACT TCGTCGACAT CGTCGACATG
TTCGCCGGAA CCGTGATCGG TGTGCCGACC AACGCGACCC GCGGCCTCCA ACACGCGGCA
CGCCTGTCCG GCAAGATCGC GTTCGTGAAC ATCGGGTTGG AAGGGCCCCG GGCAACGACG
AACCGGGTCC GAGGAGACTA CGACGCGGTG ATGGCCGGGG TACGGGCATT CCAGGACGCG
GGGCTTCCTC TGTCGCTGTC GGCGGTGGTC TACCGCTCGA CGGTGGCCGC GTTGCCGTTC
ACCTACCAGA TCGCCGATCT ACTGAACGCC GGAAAGCTCA AGCTGATCAT GCCGCTGAAG
AAGGGTAACG CGCTCGACCT CGCCGACAAC GAGTTCCTCA GCCTGGAGGA GGCCACGGCG
ACATTCGACC GGCTGGCCGA GTTGCGCACA GCGTACGACT GGCGACCGGC ACTACGGCTG
ACGTCCTGGA CCCCGGACAC CGAAGGCCAC ATGATCGTAG TCAGCCCGCG TGGGCTGGCG
AGTGCCTGGC CGGTCTACGA CGCCCCCGAC CTGCTCGAAC CACTGGGCAA CCTGCTCGAC
GAGCCGATCA CCGAGATCTG GGCGCGGTAC CGCTTCCAGC GCAACCACTA CGCCAAATAC
CTGGGGCGCT CGATCCGCAC CCTCACCCGC GCCGAGCAAC CGCCGGCCGG GCAACCTTTG
CCGCGGATCA GCCATGCGTG A
 
Protein sequence
MITSSPPPPT VDAEVQPGPG EICAPTAEPV VFTDGHHFRL RAPLDLETVA AGAAGPLSVI 
LQVTKRCNFD CSFCSETLQE RDPSLGALER IRDNLAGVPR VFLSGGEPLL RRDFVDIVDM
FAGTVIGVPT NATRGLQHAA RLSGKIAFVN IGLEGPRATT NRVRGDYDAV MAGVRAFQDA
GLPLSLSAVV YRSTVAALPF TYQIADLLNA GKLKLIMPLK KGNALDLADN EFLSLEEATA
TFDRLAELRT AYDWRPALRL TSWTPDTEGH MIVVSPRGLA SAWPVYDAPD LLEPLGNLLD
EPITEIWARY RFQRNHYAKY LGRSIRTLTR AEQPPAGQPL PRISHA