Gene Franean1_2541 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2541 
Symbol 
ID5670935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp3021004 
End bp3021327 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content68% 
IMG OID641241457 
ProductXRE family transcriptional regulator 
Protein accessionYP_001506877 
Protein GI158314369 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAATGGA ATCTGCGGCT CGCCGCCGCG AAACGTGACA TCTGGAAGGC GTCCGAGCTG 
CAACGCGCGC TGGCCGAACA TGGGCTGGTG ATTTCGGCGG GAAAGATGTC GGGCCTGTGG
TCGGGGCAGC CCGTGTCCCT CAAACTCGAC GATCTTGATG TGATTTGCGT CGTGCTGAAC
TGCGAGATCG GGGAACTGCT GACACCCGAA CCGGCGAAGG TGACACGGCC AGGCCAAGCC
GACCTGCCAC GGACCGCCGC CGCCAGTGCG GTCGCAGCCG TGGTGCCCCG CCGCCGCGAC
GGCCGCTCGC TGCCGCCGGC CTGA
 
Protein sequence
MKWNLRLAAA KRDIWKASEL QRALAEHGLV ISAGKMSGLW SGQPVSLKLD DLDVICVVLN 
CEIGELLTPE PAKVTRPGQA DLPRTAAASA VAAVVPRRRD GRSLPPA