Gene Franean1_2433 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2433 
Symbol 
ID5670829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2894898 
End bp2895587 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content69% 
IMG OID641241350 
Producthypothetical protein 
Protein accessionYP_001506771 
Protein GI158314263 
COG category[S] Function unknown 
COG ID[COG2013] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.227247 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.45285 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGCCTG TGAATCAACC ACTTGGGCAG CATGCGGCGG GAAGTTCCGG CGGTCCGCCG 
TTCGCGCTCG AGGAGGGCGA CCGGATGCTC CGGGTCCGCC TCGACGGCGG TGAGATGTAC
GCGAAGCAGG GGTCCATGGT GGCCTACCGC GGCAAGGTCG ACTTCGCCTA CAAGGGGCAG
GGCGTCGGCG GCTATCTCCG GCGCGCGGTC ACCGGCGAGG GCCAGGACCT GATGCGGGTC
AAGGGCCGCG GCACCGTCTG GTTCGCGGAG TCCGGCAGCC ACATCTCGAT CTTCCACCTG
GACAACGACC GGATCACGGT CAACGGCCGC AGCCTGCTCG CCCTGGAGTC CGGCGTCCGT
TACAAGATCA CTACGACGTC CGGCGGGATC GGTGCGATGA TAGCGGGCGG CGTGTTCAAC
ACCGAGGTCT CCGGAACGGG CGGCGTCGGC GTGCTGTGCC TGGGCAGCCC GCTCGTCCTC
CCGACGGACG AGCCGGTGTG CGTCGATCGC GACGCGGCAG TCGCCTGGAC GGCCGGCGTC
CGCACCCGGG TGATCTCCAG CTTCAAGGTG GGCAATCTGA TCGGGCGCAC CTCCGGCGAG
CTCGCCCAGA TCGAGTACAG CGGGCGCGGT GGCTTCGTGG TGGTCCAGTG TGGTGAGATC
CCGGCTCGTG GCGCGGAACC GAGCGGCTGA
 
Protein sequence
MVPVNQPLGQ HAAGSSGGPP FALEEGDRML RVRLDGGEMY AKQGSMVAYR GKVDFAYKGQ 
GVGGYLRRAV TGEGQDLMRV KGRGTVWFAE SGSHISIFHL DNDRITVNGR SLLALESGVR
YKITTTSGGI GAMIAGGVFN TEVSGTGGVG VLCLGSPLVL PTDEPVCVDR DAAVAWTAGV
RTRVISSFKV GNLIGRTSGE LAQIEYSGRG GFVVVQCGEI PARGAEPSG