Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_2433 |
Symbol | |
ID | 5670829 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 2894898 |
End bp | 2895587 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641241350 |
Product | hypothetical protein |
Protein accession | YP_001506771 |
Protein GI | 158314263 |
COG category | [S] Function unknown |
COG ID | [COG2013] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.227247 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.45285 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTGCCTG TGAATCAACC ACTTGGGCAG CATGCGGCGG GAAGTTCCGG CGGTCCGCCG TTCGCGCTCG AGGAGGGCGA CCGGATGCTC CGGGTCCGCC TCGACGGCGG TGAGATGTAC GCGAAGCAGG GGTCCATGGT GGCCTACCGC GGCAAGGTCG ACTTCGCCTA CAAGGGGCAG GGCGTCGGCG GCTATCTCCG GCGCGCGGTC ACCGGCGAGG GCCAGGACCT GATGCGGGTC AAGGGCCGCG GCACCGTCTG GTTCGCGGAG TCCGGCAGCC ACATCTCGAT CTTCCACCTG GACAACGACC GGATCACGGT CAACGGCCGC AGCCTGCTCG CCCTGGAGTC CGGCGTCCGT TACAAGATCA CTACGACGTC CGGCGGGATC GGTGCGATGA TAGCGGGCGG CGTGTTCAAC ACCGAGGTCT CCGGAACGGG CGGCGTCGGC GTGCTGTGCC TGGGCAGCCC GCTCGTCCTC CCGACGGACG AGCCGGTGTG CGTCGATCGC GACGCGGCAG TCGCCTGGAC GGCCGGCGTC CGCACCCGGG TGATCTCCAG CTTCAAGGTG GGCAATCTGA TCGGGCGCAC CTCCGGCGAG CTCGCCCAGA TCGAGTACAG CGGGCGCGGT GGCTTCGTGG TGGTCCAGTG TGGTGAGATC CCGGCTCGTG GCGCGGAACC GAGCGGCTGA
|
Protein sequence | MVPVNQPLGQ HAAGSSGGPP FALEEGDRML RVRLDGGEMY AKQGSMVAYR GKVDFAYKGQ GVGGYLRRAV TGEGQDLMRV KGRGTVWFAE SGSHISIFHL DNDRITVNGR SLLALESGVR YKITTTSGGI GAMIAGGVFN TEVSGTGGVG VLCLGSPLVL PTDEPVCVDR DAAVAWTAGV RTRVISSFKV GNLIGRTSGE LAQIEYSGRG GFVVVQCGEI PARGAEPSG
|
| |