Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_2421 |
Symbol | |
ID | 5670817 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 2877510 |
End bp | 2882684 |
Gene Length | 5175 bp |
Protein Length | 1724 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 641241338 |
Product | hypothetical protein |
Protein accession | YP_001506759 |
Protein GI | 158314251 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1112] Superfamily I DNA and RNA helicases and helicase subunits |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.220469 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.974769 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGCCC TCGACCTGGT CAAGAGCCGT TCGCTCCGCC TGCTCGACTA CCTGGCCGCG CTCGCCACCG ACCTGCGCGG TGCGCCGCGC CGCCGCCTGG CCGAGTACGC GCCGGTGCCG GTGCTGCCGC GTGACGTGCC GGTGCACGCG GCCGTGCGGC TCGGCCCCGG CGAGACGCGG GCGAGCTGGC TGGAGGTCGG CAAGGTCGCC GCCCCGGAGC CGCCACGGGT CCCCCGGGAG CTGTATCCCT ACATCGGCGG GGTGGAGGTG CTGCCGGGCG CGCCACCGGC GCTGCCGGTC GATCTGCCCG AGCGGGCGGC CGGGCGCGGT GAGGATCCCG CCGCCGTCAC CCGCGCCCAT GCCCGATGGG TTCACGACTC CTGGCAGCCC TGGGCGGCGC CGGCCCGGGC GGCCCACACC GCCCGGCAGC TCTACGAGCG GCTGTTCGAC CTGCGGTTGC GGCATGCCGC CGACACCGCC GGGCTGCAGC TCGTCTGGGG CCACTCGGTG CTGAGCTGGC AGCCGGCCGC GGCCGGTGGC GAGCAGGTAA TCGTCGAACA CCCCCTGCTG GTGACCCCCG TGCAGGTGGA GGTCGACCAG GACACCGGCC TCATCCGGGT GTCGCCGGAC GGTTCGACCG TGCTGGAGAC CGATCCGGTG CGGGGGCTGG AGGCACCGGA ACTCCGGTCG CTGCCCGGCC TGCGCGACCG GCTGCGCGCG GACCCGCCGG ACGTGTGGGA TCCGGCCGAG CTCGCCGAGA TCCACGATCA GCTGGTCGCG CCGCTCGGTC TGGACGCCGC CGTCCTGCCC GGGCCGGACC TGCCGCCCCC CGGGCCGGAC GCCCGTGTCG TCGACACGTG GGCGCTGTTC CTGCGGCCGC GGCCCGCCAC CGGCGCGCGT TTCTACAGCG AGCTGCGCGA GGCGATGGCC GAGCTCGACT TCCTGCCCGA GGCGGTCGCC GCCGTCGTCG CGCCGGACGC GCTGGTCACC GAGGCACTCG AGGAGGCCCG CGGCGAGTTC GCCGGTGGCG GGAACCCGGA TCCGATCGGC GGCGGAGCCG ACGACGGCTG GGCGGCGACA GGGGCGCGGC TGCTCATGCC GCTGCCGACC AACGATGACC AGGAGCGGGT GGCGACCCAG CTGGCGACGT CCCGTGGCGT CACCGTGCAG GGCCCGCCGG GCACGGGCAA GAGCCACACG ATCGCCAACC TGGTGTGTCA CCTGGTGGCG CACGGGCGCC GCGTGCTCGT GACCGCGCAG GACGAACAGG CGCTGGTGGT CCTGCGGGAG AAGATCCCCG CCGAGCTGCG GCACCTCTCG GTCGCCGTTC TCGGTTCCAG CCAGGCCGAC ATCGAGGAGC TGCGCGCCTC GGTGGTGGAG ATCCAGGCCG CCGTCGCCGA TGTCGACCTG CCCGCCGAGA CCCGTCAGGT CGCCGGGCTC GCCGCCGAGC TGGACGCGGT GCGTTCCCGC ACCCGCGCGC TGGAGCTCGA GCTGGTGGAG CTGCTGCGCG GCGAGGAGCA CGAGTTCGAG CTGCCACACG GCCGGGCCCG GGCGGCGGAC GTCTCCGAGT GGCTCACGCG CAACGAGCAC GAACTCGGGC TCATCCCCGA CCGGCTCGAC CCGGTGGCGC CACCGCCCCT GCGGCCGGGC GAGCTGGTCG ACCTGGTCGC GCTGGCCCGG CAGATCTCCC CCGAGGAGGC AGCGGCCGCG GGCCGGCCGC TGCCGGACCC GACGGCGCTG CCGGGCGCCA CGCCGCTGTC CGCGCTGTTC CAGCGGTTGG ACGAGCTGGG CTCCGGCGTG GCCGAGGCGG AGCGCGCCGG GCTCACCGCC ATCGCGGTCG ATCAGCTGGG CGAGGCGGGG CTCGCCCGGC TGCGCGCCGA GACCCTGGCC GGCGTCGCGG CGCTACGCAC GGTCGAGGAG CCGTGGCTGG TGGCCCTGCG CGACCAGTGC GCCTCCTCGC CACGCCTGGC CGACTTCTGG CGCGGCCAGG CGGCCGAGCT CGCGGCGGCC GTCACCACGC TGCACGCCCT GCGCGTCCGG GTGTTCGGGC ACACCGCGCA GGTGCCGGGC GGTGACCCCC GTGACCAACT CCGGCTGCTC GGCGAGCTGC GCGAGCGCCT CGCCGGCGGG CGCGGCCTGC ACCGGTTCGG TGGGCGGGAG CTGCGGGAGT TCGCCGAGCG GCTGATCGTC GACGGCTATC CGGCGAAGAC GGTCGCCGAC CTCGACATCG CGGCCGCGGT GATCGAGGGG CGGGTGCGGT CCGCCGCGGC GCTCACCCGC CATGCGGACA TGGCCGTCCA GCTCGGCGCG CCTCCCCTGG CCGATGGGCC CGGGGGCGGC GGCGAGGCGG GGGTGTTCGC CACGCTGCCC GCGCTCGACG CGGTGAGCTC CGCGATGGCG GCCGCGCTCG CCTGGGACTC CGGCCCCGGC CCGGCGCTGG CCGGCCGGCT GCGAGCGCTC TTCCCGGCGC TGCCCGTCCG CCCGACGTCC TCGGACCTGC TCCGTCACGC CGAACTGCTC GAGCTCGCCG GGGCACGGAT AGCCCAGCGC GCGACCGAGA CCGAGCTCGC CGACCTGGCC GAGCTGCTGC GGATCGGCCG GCACACGCCC GAGGCGAGTG TGCTGTGGTC GGAGCTGACC GACGCGCTAC GGAGCCGGGA TCTCGACGCC TGGGCGCGGG CGCTGGAGGA GTCGGCGCGG CTGCGTGCGC TGCGCCCGGC GGCCCACCGG CGCGCCGAGC TGGCGGAGCG GCTCGCCACC GTGACCCCCC GCTGGGCCGG GCTCATCCTC GCCGACCTAG GCGACCCCAC CACCTGCGGT GATCCGGAAC AGCTCGCCGG GCTGTGGCGG TGGCGGCAGG CCGAGACCTG GCTCGACGAC CTCCATTCCG GCGCCGACGT CCCGGCATTG CAGCGGCGTC TCGACGATGC CACCGAGAGC GTCCGCCGAC TCGTCCTCGA GGTTGCCCGT CGCTCCGCCC GTCTCGCGCT GGCGAACAAT CTCGGGCCGG AGCAGCGGCA GGCCCTCACC GGGTGGGTGC AGGCGCTGAG CCGCATCGGC AAGGGGACGG GCAGGTTCGC GGGCCGTTGG CGGGCCGAGG CGCGCGGCCA CATGACCGAG GCGATGGGCG CCGTCCCAAT CTGGATCATG CCGATCCACC GGGTGATGGA GAGCTTCGAC CCCCGGGTGA ACGATCCGTT CGACGTCGTG ATCGTCGACG AGTCCAGCCA GTGCGACGTG CTCTCGCTCG GCGTGCTCAG CCTGGGCCGC AAGGCGGTCG TCGTCGGCGA CGACCAGCAG ACCAGCCCGT CGGCCGTCGG CATCCCCCGC GACCGGGTCT TCGCCCTGAT CGAGGACCAC CTGCCCGACG TCGCGCACCG CTCGCTGCTC GACGTCGAGG CGAGCCTCTA CGACACCGCG ACGCGGGTGT TCCCGCGCAC CGTGGTGCTC AAGGAGCACT TCCGCTGCCT GCCGGAGATC ATCGGCTTCT CCAACCGGTT CTACGACCAC CAGATCCTGC CGCTGCGGGA GACGCCCGAG GTCACGGTCG GCCCGGCACT GCGGCCGGTC CGGGTGGCCG GCGGCGGGCG GGCACCGGGC AGGTTCGGCG ACGCCAACGC GGTGGAGGCG GCCGCCGTCG TCGACCAGAT CGTCGACTGC TGTGCCGACC CGGCCTACGA CGGGATGACG TTCGGCGTCG TCACCCTGCT CGGCGCGGGC CAGCCCCGGC TGATCGAGCA CAGCCTGGTC GAGAAGCTCG GGGAGGAGGA GTACGTCCGC CGCCGGATCC GGGTGGGCGA CCCGTACCAG TTCCAGGGGG ACGAGCGGGA CGTCATCTTC GTGTCCGTGG TCGCCGACGA CAACCGCTCG GCGGCCACCC GGCGGCGCGA CATGCAGCGG GTCAACGTGG CCGCGAGCCG GGCCCGTGAC CAGCTCTGGG TCTTCCACAC CGTGGCCGCG GAGACGCTGC GCGACGACGA CGTGCGCCGC CAGCTCATCG AGTACATGTA CGCCGCCCGG GCCCCCAACG AGGTGGCGCG GCTGCAGGAC CTGTGCGAGA GCGAGTTCGA GCGGGCGGTG CTGCGCGAGA TCCTCGCCCG GGGGTTCCGG GTGCGCCCGC AGCATCCGGT GGGGCGCTTC CGCATCGACC TGGTGATCGA GGGCGAAAGC GCCCGGATCG CCGTCGAGTG CGACGGGGAC CGCTACCACG GCCCGGAGCA GTGGGAGGCC GACCTACGCC GCCAGCGCAT TCTCGAGCGG CTCGGCTGGA CCTTCTGGCG GATCAGGGGC TCGGAGTTCT ACCGGCACCC CGCCCGCACC CTCGACGGGC TGTGGCAGCG TCTCGACCAG ATGGGCATCC GCCCGGCACC GGCGAGCCCC ACGCCGCCAG ACCCAGCCGA GGAGATGCGC TGGACGCCAC TCCCCCCGAC GGTCCCGACG GCGCGGATCG CGCCGGACAC CCAGCCGAAC GCCGGATCCC CGGACGCGCC CACCGCCCCG CTCCGGCCGG CCGGCCCCGG TACCCCGCCT GATTCAACGG GCCCGGGGGG CTCGGGTATC GCGGATCTCA GCACCCCGGG CGTCCCGCCC GGGGTGCCGT ACCAGCGGCC CGAGCCGCCC GGGGAGAGCA CCGCCACCGG ACCAGCGCAC CCGGGACCGA GCAGAACGGG GCCGCCTGTC GGGGCGGGGG ACGCCGTCCC GGACGGATAC CGCCATGCCG GGTGGGTCCG GCCAGAGGAG GCTGAGGCCG TGCTCACCGC CCTGGCCCTC GCCCGGGACG TACCGGTCGG GGCGACCGGG GGCCGGGCCC GCATCGTCGC GATCGACCCG TGTGATCTCC TGCTCGCTCA TCCGGAGCTC GCGGCGTCGG GGTCCGGTGG GGGCGGTGGC GAGGTCGAGC CCCAGCCCGG AGCCGCCGTG CTGCTGCGGC CGCGGGCGGG TCCGAACGCG GGCGGGCGCC GGATCACCTG GCTCACCGAA CGCGAGGCAC GTGCGGTGCT GCGGGCCGCG GACCGGCGCC GCGACCAGCC GGTCGACCTG TCCGACCGCG CCGGCACCGG GCCCGGCGGG AGCACCCGGG CCGGGCTCGT GCAGTACTTC CCCGAGGAGT CGGACGTCGC CCGGCGGTAC GGCTCGGTGA CCAGGCTGCT GCGCGCCGAG CCCGCGGGCG GATGA
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Protein sequence | MSALDLVKSR SLRLLDYLAA LATDLRGAPR RRLAEYAPVP VLPRDVPVHA AVRLGPGETR ASWLEVGKVA APEPPRVPRE LYPYIGGVEV LPGAPPALPV DLPERAAGRG EDPAAVTRAH ARWVHDSWQP WAAPARAAHT ARQLYERLFD LRLRHAADTA GLQLVWGHSV LSWQPAAAGG EQVIVEHPLL VTPVQVEVDQ DTGLIRVSPD GSTVLETDPV RGLEAPELRS LPGLRDRLRA DPPDVWDPAE LAEIHDQLVA PLGLDAAVLP GPDLPPPGPD ARVVDTWALF LRPRPATGAR FYSELREAMA ELDFLPEAVA AVVAPDALVT EALEEARGEF AGGGNPDPIG GGADDGWAAT GARLLMPLPT NDDQERVATQ LATSRGVTVQ GPPGTGKSHT IANLVCHLVA HGRRVLVTAQ DEQALVVLRE KIPAELRHLS VAVLGSSQAD IEELRASVVE IQAAVADVDL PAETRQVAGL AAELDAVRSR TRALELELVE LLRGEEHEFE LPHGRARAAD VSEWLTRNEH ELGLIPDRLD PVAPPPLRPG ELVDLVALAR QISPEEAAAA GRPLPDPTAL PGATPLSALF QRLDELGSGV AEAERAGLTA IAVDQLGEAG LARLRAETLA GVAALRTVEE PWLVALRDQC ASSPRLADFW RGQAAELAAA VTTLHALRVR VFGHTAQVPG GDPRDQLRLL GELRERLAGG RGLHRFGGRE LREFAERLIV DGYPAKTVAD LDIAAAVIEG RVRSAAALTR HADMAVQLGA PPLADGPGGG GEAGVFATLP ALDAVSSAMA AALAWDSGPG PALAGRLRAL FPALPVRPTS SDLLRHAELL ELAGARIAQR ATETELADLA ELLRIGRHTP EASVLWSELT DALRSRDLDA WARALEESAR LRALRPAAHR RAELAERLAT VTPRWAGLIL ADLGDPTTCG DPEQLAGLWR WRQAETWLDD LHSGADVPAL QRRLDDATES VRRLVLEVAR RSARLALANN LGPEQRQALT GWVQALSRIG KGTGRFAGRW RAEARGHMTE AMGAVPIWIM PIHRVMESFD PRVNDPFDVV IVDESSQCDV LSLGVLSLGR KAVVVGDDQQ TSPSAVGIPR DRVFALIEDH LPDVAHRSLL DVEASLYDTA TRVFPRTVVL KEHFRCLPEI IGFSNRFYDH QILPLRETPE VTVGPALRPV RVAGGGRAPG RFGDANAVEA AAVVDQIVDC CADPAYDGMT FGVVTLLGAG QPRLIEHSLV EKLGEEEYVR RRIRVGDPYQ FQGDERDVIF VSVVADDNRS AATRRRDMQR VNVAASRARD QLWVFHTVAA ETLRDDDVRR QLIEYMYAAR APNEVARLQD LCESEFERAV LREILARGFR VRPQHPVGRF RIDLVIEGES ARIAVECDGD RYHGPEQWEA DLRRQRILER LGWTFWRIRG SEFYRHPART LDGLWQRLDQ MGIRPAPASP TPPDPAEEMR WTPLPPTVPT ARIAPDTQPN AGSPDAPTAP LRPAGPGTPP DSTGPGGSGI ADLSTPGVPP GVPYQRPEPP GESTATGPAH PGPSRTGPPV GAGDAVPDGY RHAGWVRPEE AEAVLTALAL ARDVPVGATG GRARIVAIDP CDLLLAHPEL AASGSGGGGG EVEPQPGAAV LLRPRAGPNA GGRRITWLTE REARAVLRAA DRRRDQPVDL SDRAGTGPGG STRAGLVQYF PEESDVARRY GSVTRLLRAE PAGG
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