| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2337 |
|---|
| Symbol | |
|---|
| ID | 5670735 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 2784439 |
|---|
| End bp | 2785317 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 641241256 |
|---|
| Product | alpha/beta hydrolase fold |
|---|
| Protein accession | YP_001506677 |
|---|
| Protein GI | 158314169 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.483333 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGTGC CGCACCGGAT TTCCGCCCCC GACGGCTGCG TTCTCGTCAC GGAGGTGAGC
GGGCATGGCT CGGTCGTGGT GCTGCTGCAC GCGGGCGGTC CCGACCGACA CAGTCTCGAT
CCGTTCGCCC GGCGGCTGGC CGGCCGTCAC ACGGTCGTGC AGCCGGACAT CCGGGGCTAC
GGCGGCTCCG TCTGCCGCGA CCCGGCTCGC CACACCTGGG ACCAGTACGC CGTCGACGTC
CTCACGGTGC TCGACGGGCT CGCCGAGGCC GGCGTGGTGG CGGCGAACGT GGGTGTGGTG
GTGGCCGGGG TCGGGCTTGG CTCCACGATT GCGCTTCGCC TGGCCATCGC CCGGCCCGAC
CGGGTCGCGG CGGTGGTGGC CCTCGGCGTC GAGGACATCG AGGACGACGA GGCCAAGGCA
GCCGAGATCG CGTATTTCGA CGCGTTCGCC GACCGCGTCC GCGACGAGGG GCTGGCTGCC
GCCTGGGCGC CGATCGTCGC CAGGCTGCCG CCGGTCGTCG AGGCGATGGT CACCGACGCG
ATCCGACGCA GCGACCCGGC CAGCATCGCC GCAGCCGCGT CCATCGCGCG GGACCGTAGC
TTCCGCCACG TCGACGACCT GGCAGCAGTC CGGGTGCCGG CGCTGGTCTT CGCCGGCACC
GACTGGCGCC ACCCACGCGC GCTCGCCGCG GCGGCCGCGC GGGTGATGCC TGCGGCCACG
ATGGCGATGG CCGAGATCGG GCCGGCCGTC CGGACCGGAA AGGAACTGGC CGACGCGCTC
ATGCCGGAGC TGCTGGACTT CCTCGACGGT CCGGCGGCCG TGCCCGACGC ACGGACGACC
ACCGCGCGAC CGGCCGAGGC GACGAGACGC CTGGCGTGA
|
|---|
| Protein sequence | MTVPHRISAP DGCVLVTEVS GHGSVVVLLH AGGPDRHSLD PFARRLAGRH TVVQPDIRGY
GGSVCRDPAR HTWDQYAVDV LTVLDGLAEA GVVAANVGVV VAGVGLGSTI ALRLAIARPD
RVAAVVALGV EDIEDDEAKA AEIAYFDAFA DRVRDEGLAA AWAPIVARLP PVVEAMVTDA
IRRSDPASIA AAASIARDRS FRHVDDLAAV RVPALVFAGT DWRHPRALAA AAARVMPAAT
MAMAEIGPAV RTGKELADAL MPELLDFLDG PAAVPDARTT TARPAEATRR LA
|
|---|
| |