| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2299 |
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| Symbol | |
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| ID | 5670698 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 2749435 |
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| End bp | 2750163 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641241219 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001506640 |
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| Protein GI | 158314132 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0379402 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGCGG AGGACTCCGT GCTGCTGCGG GAGGGGCTGA CCAGGCTCCT CGAGGAGGAC
GGCTGCACCG TCACCGCCGC GGTCGGGGAC GGCGAGAGCC TGCTGCGGGC GGTCGCCCGG
ATCCAGCCGC AGGTGTGCGT CGTCGACGTC CGCCTGCCGC CGACCTTCAC CGACGAGGGC
ATCCGCGCCG CGCTCGTCCT GCGCCGGCAG TGGCCGGACG TCGCGGTGCT CGTGCTGTCC
CAGTACGTCG AGGAGCGCTA CGCCGTCGAC CTGATCGCCG GGCAGGCGCG GGGAGTCGGC
TACCTGCTCA AGGACCGGGT CTCCGACGTC GCCGACTTCC GCGAGGCGCT GCACCGGATC
GCCGCCGGCG GCACCGTGCT CGACCCGGAG GTCGTCACCC AGCTGTTGCT CCGCTCGCGC
CGGCGGGACC CGCTCGCCAG CCTGACCAGA CGGGAGTCCG AGGTGCTGGC GCTCATGGCG
CAGGGCCGGT CGAACACCGC GATCGCGGCC GCGATCGCGG TCACCGAACG GGCGGTCGAG
AAGCACGTGA CTGGCATCTT CACCAAGTTC GGCCTGGCCC CGGCCGAGGA CGACCACCGT
CGCGTGCTCG CCGTCCTGCG CTTCCTGGAC TCCGCCGCCG CCGGCGGAGT CGGTGGCGGC
GGCGCCCGCG GCGAGCGGCC GGCCCGTCCG GCGGGCGCGC GGGCGAGCGC GGGGCGCGGC
GATGTCTGA
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| Protein sequence | MIAEDSVLLR EGLTRLLEED GCTVTAAVGD GESLLRAVAR IQPQVCVVDV RLPPTFTDEG
IRAALVLRRQ WPDVAVLVLS QYVEERYAVD LIAGQARGVG YLLKDRVSDV ADFREALHRI
AAGGTVLDPE VVTQLLLRSR RRDPLASLTR RESEVLALMA QGRSNTAIAA AIAVTERAVE
KHVTGIFTKF GLAPAEDDHR RVLAVLRFLD SAAAGGVGGG GARGERPARP AGARASAGRG
DV
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