Gene Franean1_2262 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2262 
Symbol 
ID5670661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2705188 
End bp2705640 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content74% 
IMG OID641241182 
ProductMerR family transcriptional regulator 
Protein accessionYP_001506603 
Protein GI158314095 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.142473 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0766241 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATCG GTGAGCTGGC ACGACGGGCG GGGACGAGTC CCCGGGCGCT GCGGCACTAC 
GAGGACCAGG GGTTGCTCGC CACCCGGCGG CTGGCCAACG GCTACCGGGA CTACAGCGAC
GCGGACCTGC GAGCTGTCGA GGAGATCAGG GCGCTGCTCG CGGACGGGTT CGCGCTGGAG
GAGACCCGTC CGTTCGTCGA GTGCCTGCGG GCCGGGAACG AGACGGCGGC CTCCTGCCCG
GACTCGATCG AGGGCTACCG GCGCAAGATC GCCCAGATCG ACGACTACGT CGCCCGGCTC
CTGCGCTCCC GAGAACGGCT CGCCGCCCAG CTCGCGATGG CGCGGGACAC GGCCGAGCCG
TCCGGAGCCG AACCGGCTGA CGGCCCGCCC TGGCCGGCAG CGCCGCCGCA GGGTGTCCCG
GGGTGCTCGC TCTACCCGCC GCAGACCCGA TGA
 
Protein sequence
MRIGELARRA GTSPRALRHY EDQGLLATRR LANGYRDYSD ADLRAVEEIR ALLADGFALE 
ETRPFVECLR AGNETAASCP DSIEGYRRKI AQIDDYVARL LRSRERLAAQ LAMARDTAEP
SGAEPADGPP WPAAPPQGVP GCSLYPPQTR