Gene Franean1_2203 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2203 
Symbol 
ID5670602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2635358 
End bp2635912 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content70% 
IMG OID641241123 
Producthypothetical protein 
Protein accessionYP_001506544 
Protein GI158314036 
COG category[S] Function unknown 
COG ID[COG3247] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.42645 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.21455 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACCA CGTATCGACA GAACCGGGAG ACGCAGCGCC CGAGCTCGCT GTGGTCGGCC 
CTGGTCATCC TCGGAATCGC GGTCACGGTC CTGGGGTTGC TGCTCATCAC CAATCCCTTC
ACCACCGTCG GCGCGCTGGC CGTCATCGCC GGTGTGGCTC TTCTCGTCTC CGGCATCACC
GAGATCGTCT CCGCCGTACG CACCGAGAAC AGCAGCTCCG CCATCTTCTT CGGCGCGCTG
ACCGCCATCG CCGGCGTGGT GATCCTGCTG TGGCCGGGGG TGACGCTGCA CGCGATAGCG
CTGATCGTCG GTGCGGCCCT GATCGTCGCG GGGGTGGTCC GGGCACTGCT GGTGCTGGCG
AGTCGGAACG GCCAGGCCGG CCGCACCGGA AGCGTGGCCC GTGGCCTGCT GATCGCCGCG
CTCGCCGTGG TCCTCGGGGT GCTGGCCCTG GCCTGGCCGT CCTCGACCGT GGTGGTGCTC
GCGGTGCTGT TCGGCATCCA GCTCGTCGTC ACCGGCGTGA CCGAGGTGGC ACTCGGCCTG
GCCCTGCGCC CCTGA
 
Protein sequence
MTTTYRQNRE TQRPSSLWSA LVILGIAVTV LGLLLITNPF TTVGALAVIA GVALLVSGIT 
EIVSAVRTEN SSSAIFFGAL TAIAGVVILL WPGVTLHAIA LIVGAALIVA GVVRALLVLA
SRNGQAGRTG SVARGLLIAA LAVVLGVLAL AWPSSTVVVL AVLFGIQLVV TGVTEVALGL
ALRP