Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_2202 |
Symbol | |
ID | 5670601 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 2634451 |
End bp | 2635182 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641241122 |
Product | protein tyrosine/serine phosphatase |
Protein accession | YP_001506543 |
Protein GI | 158314035 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2365] Protein tyrosine/serine phosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.534636 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.21358 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAACAG AAGATCTCGC CACGGAACGG CTCGCCAACC TGCGGGACGT CGGCGGCATG ACCACCACGG ACGACCGCGT CACCAACACG GGCGTGCTGT ACCGCAGCGA GATGCCCCGG GTCGAGGACG CCCGGCCGGC GACGGAGTTC ACCTGGCCCC CGCCGACCGT GGTCGATCTG CGCTCCGCGG TCGAGCGGGG GAGCTCCCCG CACCCGCTGT CGCTGATCGG CTCGGAGATC CACGTGATGC CCCTGCTCGG CGAGGAGACC GGCCGGGTCA GCGACTCCCT GCCGCCGGAC GCGCTCGCGG GCGGCCTGCG CACGCTGTAC GCCGCGATGC TCGACATCGC GACGCCCCGG CTGGTGGAGA TCCTCGACCT GGCGGCGGAG GCCCCCGGTC CGCTCCTGGT GCACTGCGCG GCCGGCAAGG ACCGCACGGG CGTGGTCGTC GCCCTCCTCC TGCGCCTGGC CGGTGTCGTC CCGGAGCAGG TGGTCGCCGA CTACCTGGTT ACCGGCGAGA ACATGCCGGG CGTGCTGCGC CGCCTGCGAG GGCACGCGAT CCTCCCCGAC GGCCGGGTCG TCGACAAGGA GGTCACCAAG GTCTCGGTGG ACGCCGTCAA GCAGGTGCTG ACCATCATCG ACGGGCACCC GCAGGGCCCG GAGGGCTGGT TCCTCGACCG CGGCGCCCGG CCCGAGGCCG TCGAACTCTG GCGCAAGCGC ATCCTGGGCT GA
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Protein sequence | MGTEDLATER LANLRDVGGM TTTDDRVTNT GVLYRSEMPR VEDARPATEF TWPPPTVVDL RSAVERGSSP HPLSLIGSEI HVMPLLGEET GRVSDSLPPD ALAGGLRTLY AAMLDIATPR LVEILDLAAE APGPLLVHCA AGKDRTGVVV ALLLRLAGVV PEQVVADYLV TGENMPGVLR RLRGHAILPD GRVVDKEVTK VSVDAVKQVL TIIDGHPQGP EGWFLDRGAR PEAVELWRKR ILG
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