| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2138 |
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| Symbol | |
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| ID | 5670538 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 2566594 |
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| End bp | 2567565 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641241059 |
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| Product | sortase family protein |
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| Protein accession | YP_001506480 |
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| Protein GI | 158313972 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3764] Sortase (surface protein transpeptidase) |
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| TIGRFAM ID | [TIGR01076] LPXTG-site transpeptidase (sortase) family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCGGCGA CGAATCGCCG GCACCTGGCG GATTCGCTGA CGGATCTGCC CGTCCAGCCC
GGAGCCGGAC GTCCTCCGGC CCCGGCGTCG CCGACCGCGG ATCCGCACCT GGGGGAGCCG
GCGCATCGGG GCGCGCGGGC GGCACCCGGA GGGCCTGGCC GGAGCCGGGG CGCTCGGCGG
CCCGGGCTGG TTCGCCACAC CCCCTGGCCA CGGCGGGTCC AGCCCGATCG AGTGGACGGC
CGGAGACGCC GGCGTAACCC GGTGGCGGGG CTGGCGGATC GGCCGGTTGG CGGTCGGGTC
TCCCGGGGCC TCGGCGAGGT CATGATCACA GCGGGTCTGG TGGTGGTGCT CTTCCTCGCC
TACCAGCTGT GGATCACCGA CATCTTCGCG GCCAGGACGC AGGACCGGCT CCGAAACGAC
CTGACCACGG CGTGGTCTCG ACAACCGCAT CCTCGGGCTC CCGCCGAGGC TGCGAAACCA
CGACCGGTCG TGCCGCCCGT CGAACTGGGC GAGGGAGTCG CTGTCCTGCG GGTCCCCCGC
TTCGGTGCCG ACTACGCACC CGTGGTTGTG GAAGGTGTGT CGGTGGCGGC GCTACGCCGC
GGACCTGGGC ATTTCCCGGG CACTGCCATG CCGGGCGACG TAGGGAACTT CGTCGTGTCC
GGTCACCGCA CCACGTATGG AAAGCCGTTC AGCCGGCTGG ACGAGCTGAG AGTGGGCGAT
CCGCTCGTGG TGGAGGTGGC AGACCGGTAT TTCACCTACC GGGTCACCGG CTCGGAGGTC
GTGGACCCCC ATCGGCTGGA CGTGACCTAC CCGGTTCCAG GGCACGCCGG AGTCGCTCCC
ACCAGGGCGT TGATGACACT GACCACCTGC CATCCACGAT TCTCGGCGCG GAGTCGACTC
ATCGTCTTTG CCAACCTCGA CGAGACCACG GACAAGTCCG ACGGACCACC TCGCGCGCTC
GCGGACGAAT AG
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| Protein sequence | MPATNRRHLA DSLTDLPVQP GAGRPPAPAS PTADPHLGEP AHRGARAAPG GPGRSRGARR
PGLVRHTPWP RRVQPDRVDG RRRRRNPVAG LADRPVGGRV SRGLGEVMIT AGLVVVLFLA
YQLWITDIFA ARTQDRLRND LTTAWSRQPH PRAPAEAAKP RPVVPPVELG EGVAVLRVPR
FGADYAPVVV EGVSVAALRR GPGHFPGTAM PGDVGNFVVS GHRTTYGKPF SRLDELRVGD
PLVVEVADRY FTYRVTGSEV VDPHRLDVTY PVPGHAGVAP TRALMTLTTC HPRFSARSRL
IVFANLDETT DKSDGPPRAL ADE
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