Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_2080 |
Symbol | |
ID | 5670481 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 2505396 |
End bp | 2506562 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 641241002 |
Product | ABC transporter related |
Protein accession | YP_001506423 |
Protein GI | 158313915 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.669128 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCGGAGG TCCTGGCAGT CGAGGTGACC GATCTGGTCA AGATCTACCG GCGGTCCGCC GGCGGGAACA CCGCACGTCC GCGCTACCTG CGCGCCGGAA CGCCCGAGGC CTCCGGAGGC CCCGCGACCA CACCAAGATC TACCCGAGCC CACGGGCGCC GCCAGGCGCA CCCGCCCACC GAGACCAAAC AGGGTGACGC GCCGCCGCCC AGGCGTGCCG GCCGCGGCGC ACAGACCCGC GGCGCACAGA CCATCGAGGG CCAGGTCCTT CCCAGCGGGG AGCGCGCGGC CCAGATCCGG GCGGTCGACG GCCTGTCGCT GAGCGTCTCG GTGGGTTCCG TCACCGCCGT GCTCGGGCCG AACGGCGCCG GCAAGACCAC CACGATCGAG ATCTGCGAGG GATTCCGGGC GGCCGACAGC GGCGAGGTCC GCGTCCTCGG CCTGGACCCG ATCCGCGACG GCGCCGCGCT CCGCCCGCGG GTGGGTGTGA TGTTGCAGGC CGGCGGCATG TACCCGGGCG CGCGCGCCGG CGAGATGCTG CGGCTGATCG CCGCGCACCA TGCCAACCCG CTCGACGCGG GCGTCCTGAT GGAACGCCTC GGGCTCGCCG AGGCCGCGGG CGTGCCGTTC CGCCGGCTCT CCGGCGGCCA GCAGCAGCGG CTCTCCCTCG CGATGGCCGT CGTCGGCCGG CCCGAGCTGG TCTTCCTCGA CGAGCCGACG GCGGGCCTCG ACGTCCAGGG GCGCCGCGAC ACCTGGGAGC TCATCGAGGA GCTGCGGCTG TCCGGCGTCA CCGTCGTGCT CACCACCCAC GCGATGGACG AAGCCGAGCG CCTCTCCGAC CAGGTCGTGA TCGTGAACCG GGGCCGGGTC GTCGCCGCCG GGTCGCCGGC CGAGCTGACC CGCGGCGGCG CCGAGGGCCA GCTCCGCTTC CGCGCGCCGG CCGGCCTCGA CGTCGAGCGC CTGCTGCTGG CCCTGCCCGA CGGCACGACC GGCCGGGAGG GCCCGTCCGG CCACTACCTG GTGCAGGGCA CCGTCGACCC CCAGCTGCTC GCCGCGGTCA CCGCGTGGTG CGCCAGCAAC GGCGTGCTCG CCGAGGACCT GCGTGTCGAA CAGCGCACCC TGGAGGACGT GTTCGTGGAG CTGACCGGCT CGGAGCTGGC GTCATGA
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Protein sequence | MAEVLAVEVT DLVKIYRRSA GGNTARPRYL RAGTPEASGG PATTPRSTRA HGRRQAHPPT ETKQGDAPPP RRAGRGAQTR GAQTIEGQVL PSGERAAQIR AVDGLSLSVS VGSVTAVLGP NGAGKTTTIE ICEGFRAADS GEVRVLGLDP IRDGAALRPR VGVMLQAGGM YPGARAGEML RLIAAHHANP LDAGVLMERL GLAEAAGVPF RRLSGGQQQR LSLAMAVVGR PELVFLDEPT AGLDVQGRRD TWELIEELRL SGVTVVLTTH AMDEAERLSD QVVIVNRGRV VAAGSPAELT RGGAEGQLRF RAPAGLDVER LLLALPDGTT GREGPSGHYL VQGTVDPQLL AAVTAWCASN GVLAEDLRVE QRTLEDVFVE LTGSELAS
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