Gene Franean1_2070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2070 
Symbol 
ID5670471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp2494351 
End bp2494827 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content68% 
IMG OID641240992 
Producthypothetical protein 
Protein accessionYP_001506413 
Protein GI158313905 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.353218 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.424952 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCTCCG GCCGGCGGCC GCCGCGTCGC CCGATCCGCG GCCGCGGTGC CGCGGTCCGG 
TGGGCCGCGA CGGTGAGAGG AGGAATGGTG GACCCCGACT TCCCGTTGCT CAGTGTCTTC
CTTTACATGC TGTGGTTCTT CTGTTTCACG ATGTGGCTGT TCCTGATGTT CACGGTGATC
ACGGACGTCT TCCGCAGCCA TGATCTCTCC GGCTGGGGCA AGGCCGGCTG GACGGTGCTG
ATCATTGTCC TGCCGCTGAT CGGTTTGCTG GCCTACCTGA TCGTCAGGGG CAGCTCCATG
CACGACCGCC AGGCCCGGCA GGCGGCATCC CAGGCCGACA TGTGGCGCAC CGAGGTCCGC
GCGGCCGCCG GCCGGCCGAG CGCCGCCGAC GAGCTCAGCC GGCTTGCGGA CCTCCGCGAC
CACGGAGTCA TCAGCACCAA CGAGTTCGAA CGGGAGAAGA CGAAGATCCT GGCCTGA
 
Protein sequence
MSSGRRPPRR PIRGRGAAVR WAATVRGGMV DPDFPLLSVF LYMLWFFCFT MWLFLMFTVI 
TDVFRSHDLS GWGKAGWTVL IIVLPLIGLL AYLIVRGSSM HDRQARQAAS QADMWRTEVR
AAAGRPSAAD ELSRLADLRD HGVISTNEFE REKTKILA