Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_2002 |
Symbol | |
ID | 5670403 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 2407937 |
End bp | 2408437 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641240923 |
Product | protease domain-containing protein |
Protein accession | YP_001506345 |
Protein GI | 158313837 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.079846 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCACAT TCCTGTTGAG CGTCCACGTT CTCGTAGCGA TCATCGCCAT CGGCCCGGTG ACGGTCGCGG CGAGCATGTA CGCGCCGGCG GTGCGGGCGG CGCTGCGTGA CCCGGGCGAT GTCAGGATGG CGGGAGTGGT CGGCACGCTG CACCGCATCT GCAACGTCTA CGCGGCGATC GGCATCACCG TGCCGATCTT CGGTTTCGCC ACCGCCGCGA GCATGGACGT CCTCGGCGAC CCGTGGCTCG TCACCTCGAT CATCCTGACG GGGCTGGCCG CGGTGCTGCT GGCGACGGCG GTCCTCCCGT GGCAGCGGCA GCTTCTGGAG GAGATCGCCC CAGGCGGGGC CACCGGGCCG GCCGGCGCCG GGCACGCGAA CCCGGCGGCC GTCGCCGCAC GGACGAAGCG GCTCGCGATG ACCACTGGCA TGTTCAGCCT GCTCTGGGCC GTGGTCACGG TGCTGATGAT CGCCCGTCCG GGGTCGACCA CAGGCGTCTG A
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Protein sequence | MTTFLLSVHV LVAIIAIGPV TVAASMYAPA VRAALRDPGD VRMAGVVGTL HRICNVYAAI GITVPIFGFA TAASMDVLGD PWLVTSIILT GLAAVLLATA VLPWQRQLLE EIAPGGATGP AGAGHANPAA VAARTKRLAM TTGMFSLLWA VVTVLMIARP GSTTGV
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