| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1962 |
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| Symbol | |
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| ID | 5670363 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 2358374 |
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| End bp | 2359366 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 641240883 |
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| Product | helix-turn-helix type 11 domain-containing protein |
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| Protein accession | YP_001506305 |
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| Protein GI | 158313797 |
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| COG category | [K] Transcription |
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| COG ID | [COG2378] Predicted transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000800393 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTCCA GCCGGCTGAT GGCTCTGCTG CTCCATCTGC AGGCGCACGG CCGGGCCACG
GCGGGGGAGC TCGCCGCCCA GTTCGAGGTG TCCGTCCGCA CCGTGCGCCG GGACGTGGCC
GCGCTCGCCG AAGCGGGTGT CCCACTGTGG TCTGAGCCCG GCCCGCACGG CGGGATCCGT
CTCGTCGAGG GCTGGCGGAC GAACCTGGAC GGGCTGACCG GCGACGAGGC GTCCGCGCTG
CTCATCGCCG GGGCGGGCGG GGACGTGCTC GGCGGCCTCG GCCTCGAGAC GGTCGCCGCG
GCCGCGCAGA CCAAGATCCT CGCGACGCTG CCGCCGGAGC TGCGGGCACG GGCGGGCCGG
GTCCGGGAAC GCTTCCACCT CGACGCGCCG GGCTGGTTCG GCTCCGAGGA GCCCGTGCCG
CACCTCGCGG TCGTCGCGGG CGCGGTCTGG TCCGGGCAGC GGATCACCGT CTGTTACGGG
CGGCCCGACC GGACGGTGGA GCGTTCTCTC GAGCCGCTGG GCCTCGTTCT CAAGGCCGGT
GTCTGGTATC TCGTGGCCCG CGGCGGGTCC GCCGTCCGCA GCTACCGGAT CGGCCGGATC
GTCGAGGCGG CGGTCCGGAG CGGGCCGGAG GGCCGCTTCA CCCGGCCCGC CGACTTCCAC
CTGGCGCGGT GGTGGGCGTC GTCGAACGAG GACTTCGCGC GCTCGCTGCT GCGCTGGCCG
GCGCGGCTGT GGCTGTCCCC GCGAGGCCTG CGGAGCCTGC CCGGAGTGCT CGGCCCGCTG
GCCGGCCAGC GGGCGCTGGC CACGGCCGGC GAGCCCGACG CGGATGGCTG GCGGGAGGTG
GAGGTCTGGT TCGAGGGCCC CGATGTCGCC GAGAGCCAGC TCTGGGCATT CGGCCCGCAC
GTGCGGGTGC TCGCCCCCGA CTCCCTGCGC GAGGCCCTCG CGCGGACGGC ACAGCAGGCG
GCGGCGAACA ACGGCGCTCC GAAGTCCGGC TGA
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| Protein sequence | MRSSRLMALL LHLQAHGRAT AGELAAQFEV SVRTVRRDVA ALAEAGVPLW SEPGPHGGIR
LVEGWRTNLD GLTGDEASAL LIAGAGGDVL GGLGLETVAA AAQTKILATL PPELRARAGR
VRERFHLDAP GWFGSEEPVP HLAVVAGAVW SGQRITVCYG RPDRTVERSL EPLGLVLKAG
VWYLVARGGS AVRSYRIGRI VEAAVRSGPE GRFTRPADFH LARWWASSNE DFARSLLRWP
ARLWLSPRGL RSLPGVLGPL AGQRALATAG EPDADGWREV EVWFEGPDVA ESQLWAFGPH
VRVLAPDSLR EALARTAQQA AANNGAPKSG
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